| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473718
Identifier: 13473718
GI number: 13473718
Start: 3496382
End: 3496984
Strand: Reverse
Name: 13473718
Synonym: mll4411
Alternate gene names: NA
Gene position: 3496984-3496382 (Counterclockwise)
Preceding gene: 13473719
Following gene: 13473715
Centisome position: 49.7
GC content: 60.86
Gene sequence:
>603_bases ATGCCTCCGCATCCGTTTTGTTTCGGTATCGAAACGAGCCCTTCACCCTTTCGTTGGCGGGCGCTCGAAGCCCTTGCCGG TCTCGAGCAGGCTCTTGAGACTGGCCAGCACCAGCGGCCAGCCCTTACTGACATTCGGGATCAGCCGGTGTGGGCCGTCG GCCTCGTGGGTGACGGCAAGCTTCATCAACTCGCCGTCCTGTTCTATGGCGAAGGTGCAGCGCGTGTAGCCGTCTTCCTT GACCTCCGGCATCCACTCATTGCGCCATTTGATGACCAGGCGCCGCGGCGGGTCGATCTCGAGGATCTCGCCCGAGTCGG CGATGCGGCCGTCGGGGAAGATCAGTTTCCAGCTGGAGCCGACCTTCCACTCGCTCTCCTGATAGGAGCAGAGGAAGAAC TGCCGGTTGAACTCCGGGTCGGTCAGCGCCTCCCAGAGCTTTTCGGCCGTGGTGCGGATGTAGGTCACGTAAACGAAGCT GTTGCTCATCAGTCTTCCCTTTCGAGGCGTTTCTTCAGATCACTCAATGCATCCAGCCGATGGCGCTCGAACTTGCCGAT CCAGCGCTCGGCGATCTCGTTGATCGGAACCGGGTTGAGGTAG
Upstream 100 bases:
>100_bases AGCGCCGTGAAGATGCGTTCCATAGGCGCTTCGATCTCGGCCGACGCCATGATCGTCTCGCCATTGGTCATGCTCTGTAC CCCGAGGACGTGCATCATCG
Downstream 100 bases:
>100_bases TGCTGCTTCTCGCGTCCCTTGCGCAGCGTGGTGACGAGGTTGGCTTCCTCCAGGATCGCCAAATGCTTGGTCACCGCCTG GCGTGTCATGTCCATCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MPPHPFCFGIETSPSPFRWRALEALAGLEQALETGQHQRPALTDIRDQPVWAVGLVGDGKLHQLAVLFYGEGAARVAVFL DLRHPLIAPFDDQAPRRVDLEDLARVGDAAVGEDQFPAGADLPLALLIGAEEELPVELRVGQRLPELFGRGADVGHVNEA VAHQSSLSRRFFRSLNASSRWRSNLPIQRSAISLIGTGLR
Sequences:
>Translated_200_residues MPPHPFCFGIETSPSPFRWRALEALAGLEQALETGQHQRPALTDIRDQPVWAVGLVGDGKLHQLAVLFYGEGAARVAVFL DLRHPLIAPFDDQAPRRVDLEDLARVGDAAVGEDQFPAGADLPLALLIGAEEELPVELRVGQRLPELFGRGADVGHVNEA VAHQSSLSRRFFRSLNASSRWRSNLPIQRSAISLIGTGLR >Mature_199_residues PPHPFCFGIETSPSPFRWRALEALAGLEQALETGQHQRPALTDIRDQPVWAVGLVGDGKLHQLAVLFYGEGAARVAVFLD LRHPLIAPFDDQAPRRVDLEDLARVGDAAVGEDQFPAGADLPLALLIGAEEELPVELRVGQRLPELFGRGADVGHVNEAV AHQSSLSRRFFRSLNASSRWRSNLPIQRSAISLIGTGLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21835; Mature: 21704
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPHPFCFGIETSPSPFRWRALEALAGLEQALETGQHQRPALTDIRDQPVWAVGLVGDGK CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCC LHQLAVLFYGEGAARVAVFLDLRHPLIAPFDDQAPRRVDLEDLARVGDAAVGEDQFPAGA EEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCEECHHHHHHHCCCCCCCCCCCCCC DLPLALLIGAEEELPVELRVGQRLPELFGRGADVGHVNEAVAHQSSLSRRFFRSLNASSR CCCEEEEECCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH WRSNLPIQRSAISLIGTGLR HHCCCCHHHHHHHHHCCCCC >Mature Secondary Structure PPHPFCFGIETSPSPFRWRALEALAGLEQALETGQHQRPALTDIRDQPVWAVGLVGDGK CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCC LHQLAVLFYGEGAARVAVFLDLRHPLIAPFDDQAPRRVDLEDLARVGDAAVGEDQFPAGA EEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCEECHHHHHHHCCCCCCCCCCCCCC DLPLALLIGAEEELPVELRVGQRLPELFGRGADVGHVNEAVAHQSSLSRRFFRSLNASSR CCCEEEEECCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCH WRSNLPIQRSAISLIGTGLR HHCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA