| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473666
Identifier: 13473666
GI number: 13473666
Start: 3451884
End: 3452426
Strand: Direct
Name: 13473666
Synonym: mlr4340
Alternate gene names: NA
Gene position: 3451884-3452426 (Clockwise)
Preceding gene: 13473665
Following gene: 13473671
Centisome position: 49.06
GC content: 62.25
Gene sequence:
>543_bases ATGTGGCGAAGCATCACCAATTCCAACATGCGGTTTGCAAACGTGACTGGACGTGACCGAAAAGGCGCACCGCCGCGACC GCTTCGCCGGCTCTTGCAATTGCAGCGCGAAGGGGCCAATTTTGGTTGGCAAAGATTCATTTTGAAGGATCGAGGCATGA CTGACGACAGCGGCGGGATGGGGGATGGTGACGCATCCGCAATATTGATCCCGCTGCACGAGGCGCGCAGCGCACGCCTC GACCAGCCGGTGCGCTTCGACCGGCGTGAACTGGACCAGATCCTCAGGTTGTACGGACGCATGGTCGCCGCCAATGAATG GCGCGACTACGCCATCGATCATCTGACCGACAGGGCGGTGTTTTCCGTCTTCCGCCGCGCCAGCGAAGTGCCGCTGTTCC AGATCGTCAAGGACCCGAAACTGGCCCGCAAACAGGGCGCCTTCGCCGTCATCGCCGCCGGCGGGCGCATCCTCAAACGC GGCCAGGAACTCGGCCGCGTGCTCGGTGTCTTCGACAGCAAGCTGAGAGTGGTCGAGGCCTGA
Upstream 100 bases:
>100_bases GGCTTGGGGTTTACGAGCCGGTGCCGGACCGAACCGTCTCAGGCAACGCCGGTAAATTCGTCGGAGATTGGGGCATTAGC GCGGATAAAAAACGGCGGAA
Downstream 100 bases:
>100_bases GCTGGGAATTGAGGAATTGAGGAAAAAGGCACTCAGCGCCTGACGTAAGTGCCTCTTCTTGTTCTTCAATTCTTCAATTC TTCAATTCTTCAATTCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MWRSITNSNMRFANVTGRDRKGAPPRPLRRLLQLQREGANFGWQRFILKDRGMTDDSGGMGDGDASAILIPLHEARSARL DQPVRFDRRELDQILRLYGRMVAANEWRDYAIDHLTDRAVFSVFRRASEVPLFQIVKDPKLARKQGAFAVIAAGGRILKR GQELGRVLGVFDSKLRVVEA
Sequences:
>Translated_180_residues MWRSITNSNMRFANVTGRDRKGAPPRPLRRLLQLQREGANFGWQRFILKDRGMTDDSGGMGDGDASAILIPLHEARSARL DQPVRFDRRELDQILRLYGRMVAANEWRDYAIDHLTDRAVFSVFRRASEVPLFQIVKDPKLARKQGAFAVIAAGGRILKR GQELGRVLGVFDSKLRVVEA >Mature_180_residues MWRSITNSNMRFANVTGRDRKGAPPRPLRRLLQLQREGANFGWQRFILKDRGMTDDSGGMGDGDASAILIPLHEARSARL DQPVRFDRRELDQILRLYGRMVAANEWRDYAIDHLTDRAVFSVFRRASEVPLFQIVKDPKLARKQGAFAVIAAGGRILKR GQELGRVLGVFDSKLRVVEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20445; Mature: 20445
Theoretical pI: Translated: 11.61; Mature: 11.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRSITNSNMRFANVTGRDRKGAPPRPLRRLLQLQREGANFGWQRFILKDRGMTDDSGGM CCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC GDGDASAILIPLHEARSARLDQPVRFDRRELDQILRLYGRMVAANEWRDYAIDHLTDRAV CCCCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSVFRRASEVPLFQIVKDPKLARKQGAFAVIAAGGRILKRGQELGRVLGVFDSKLRVVEA HHHHHHHCCCCHHHHHCCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCEEEECC >Mature Secondary Structure MWRSITNSNMRFANVTGRDRKGAPPRPLRRLLQLQREGANFGWQRFILKDRGMTDDSGGM CCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC GDGDASAILIPLHEARSARLDQPVRFDRRELDQILRLYGRMVAANEWRDYAIDHLTDRAV CCCCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSVFRRASEVPLFQIVKDPKLARKQGAFAVIAAGGRILKRGQELGRVLGVFDSKLRVVEA HHHHHHHCCCCHHHHHCCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA