| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yieF [H]
Identifier: 13473655
GI number: 13473655
Start: 3441791
End: 3442324
Strand: Direct
Name: yieF [H]
Synonym: mlr4323
Alternate gene names: 13473655
Gene position: 3441791-3442324 (Clockwise)
Preceding gene: 13473654
Following gene: 13473658
Centisome position: 48.92
GC content: 67.79
Gene sequence:
>534_bases GTGCTGAACCTTCTCGCCATCTCCGGCAGCCTGCGGGCCGCCTCCACCAATTCTGCCCTGGTCGCGGCACTGGCGCGCAA CGCGCCGGCGGGCTGCCGCGTCACCGTCTATGACGGGCTCAGCCGTCTGCCGATCTTCAATCCCGACGACGAGGGCGAGC GCACGCCGAGCGAAGCGGCCGAATTCATCGATGCCGTCACCGGCGCCGACGGCATCATCGTCTCCTGCCCCGAATATGCC CATGGCGTGCCGGGCGGACTGAAGAACGCGCTCGACTGGCTGGTCTCGCGCGACGCCGCCGTCGCCAAGCCCGCCATGCT GGCCCACGCCTCGCCGCGCTCGCTGTTCGCCCGTGCCGCGCTGGCTGAGATCATGCGGACGATGTCGTTCGCGATGTATG ATGGTGGGCTGGAAATTGCCCTGCTGGGGAAGAAGCCGCCGGAGGTGGAGGGCATCCTTGCGGAGCCGGGAAATGTGGTG GCGATGCGCGATGCGGTGCAGGGTTTCGCGGAGTTCATACGCGGGCAAACATAG
Upstream 100 bases:
>100_bases TGCCGATTCGGCCGAGGCGACCGACCGCTGGCTCGACGAGGAATACAAGCAGACGATGTGGTAGGTTTCCCAGCGATTCG CGCCGGACCGATCCCACGCT
Downstream 100 bases:
>100_bases GGTCGTCATCCTAGGGCGCAAGGAACGAAGCGACGCAGCGCAGACCCTAGGATCCATGCCGTGACGTCAAGGCATTGCAA TCCTTACAGAATTCTGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MLNLLAISGSLRAASTNSALVAALARNAPAGCRVTVYDGLSRLPIFNPDDEGERTPSEAAEFIDAVTGADGIIVSCPEYA HGVPGGLKNALDWLVSRDAAVAKPAMLAHASPRSLFARAALAEIMRTMSFAMYDGGLEIALLGKKPPEVEGILAEPGNVV AMRDAVQGFAEFIRGQT
Sequences:
>Translated_177_residues MLNLLAISGSLRAASTNSALVAALARNAPAGCRVTVYDGLSRLPIFNPDDEGERTPSEAAEFIDAVTGADGIIVSCPEYA HGVPGGLKNALDWLVSRDAAVAKPAMLAHASPRSLFARAALAEIMRTMSFAMYDGGLEIALLGKKPPEVEGILAEPGNVV AMRDAVQGFAEFIRGQT >Mature_177_residues MLNLLAISGSLRAASTNSALVAALARNAPAGCRVTVYDGLSRLPIFNPDDEGERTPSEAAEFIDAVTGADGIIVSCPEYA HGVPGGLKNALDWLVSRDAAVAKPAMLAHASPRSLFARAALAEIMRTMSFAMYDGGLEIALLGKKPPEVEGILAEPGNVV AMRDAVQGFAEFIRGQT
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1790149, Length=114, Percent_Identity=35.0877192982456, Blast_Score=71, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 18466; Mature: 18466
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNLLAISGSLRAASTNSALVAALARNAPAGCRVTVYDGLSRLPIFNPDDEGERTPSEAA CCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHH EFIDAVTGADGIIVSCPEYAHGVPGGLKNALDWLVSRDAAVAKPAMLAHASPRSLFARAA HHHHHHCCCCCEEEECCHHHCCCCCHHHHHHHHHHCCCCHHHCCHHHHCCCHHHHHHHHH LAEIMRTMSFAMYDGGLEIALLGKKPPEVEGILAEPGNVVAMRDAVQGFAEFIRGQT HHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCEEEHHHHHHHHHHHHCCCC >Mature Secondary Structure MLNLLAISGSLRAASTNSALVAALARNAPAGCRVTVYDGLSRLPIFNPDDEGERTPSEAA CCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHH EFIDAVTGADGIIVSCPEYAHGVPGGLKNALDWLVSRDAAVAKPAMLAHASPRSLFARAA HHHHHHCCCCCEEEECCHHHCCCCCHHHHHHHHHHCCCCHHHCCHHHHCCCHHHHHHHHH LAEIMRTMSFAMYDGGLEIALLGKKPPEVEGILAEPGNVVAMRDAVQGFAEFIRGQT HHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCEEEHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]