Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13473654

Identifier: 13473654

GI number: 13473654

Start: 3441134

End: 3441754

Strand: Direct

Name: 13473654

Synonym: mlr4322

Alternate gene names: NA

Gene position: 3441134-3441754 (Clockwise)

Preceding gene: 13473653

Following gene: 13473655

Centisome position: 48.91

GC content: 64.73

Gene sequence:

>621_bases
ATGGAATTCGTCACCACGCACGAAGAGCTGAGGACGATCTACAAGACGCCACGGCCTACCGACGGTTCCATCCGCAAGGA
GCTGAAGGCACTCGACGGCCACTGCCGCTCCTTCATCGGCAAGAGCCCCTTCGTGCTGATCGGCTCGTCCGACGGCGAAG
GCAATGCCGACGTGACGCCGAAAGGTGACAAGCCGGGCTTCGCCGCCATTCTCGACGACAGGACCATCGCCATCCCCGAC
CGGCCCGGCAACAACCGGCTGGACACGCTGGAGAACATCCTGCGCAATCCCTCGGTCGGACTGCTCTTCCTCATCCCCGG
CATGAACGAGACGCTGCGCGTCAATGGCGATGCCCGCATCACCGTCGACGCCGGTTTGCGCGAGCGCCTCGCCGTCGACG
GCAAGGAGCCGCAAAGCGTCACCGTGGTCACGGTCAAGGCGGCCTACATGCATTGCGCCAAGGCCTTCATGCGCTCCGAT
CTGTGGAAGCCGGACACTTGGTACGACCGCGCGACGCTGCCGACGCTCGGCCAGATCCTGCGCGACCAGCTGGTGGTTGC
CGATTCGGCCGAGGCGACCGACCGCTGGCTCGACGAGGAATACAAGCAGACGATGTGGTAG

Upstream 100 bases:

>100_bases
GTTCACTTTCAGCCAGATGCCGCTGATCCTGCGCCATTCGCTGGACGACAAGGCAAGCGGGGAAGAGAAGGCTGGCAAGT
AGGCAAACAGGGAGAGGGCC

Downstream 100 bases:

>100_bases
GTTTCCCAGCGATTCGCGCCGGACCGATCCCACGCTGTGCTGAACCTTCTCGCCATCTCCGGCAGCCTGCGGGCCGCCTC
CACCAATTCTGCCCTGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphohydrolase; Pyridoxamine 5-Phosphate Oxidase; Hydrolase; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5-Phosphate Oxidase-Related Protein; NTP Pyrophosphohydrolase; Pyridoxine Biosynthesis Protein; Phenylacetate-CoA Oxygenase/Reductase PaaK Subunit; Transcriptional Regulator AraC Family; Pyridoxamine 5-Phosphate Oxidase Family; Fmn Flavoprotein; Pyridoxamine 5\-Phosphate Oxidase Family Protein; Pyridoxamine 5-Phosphate Oxidase-Related

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MEFVTTHEELRTIYKTPRPTDGSIRKELKALDGHCRSFIGKSPFVLIGSSDGEGNADVTPKGDKPGFAAILDDRTIAIPD
RPGNNRLDTLENILRNPSVGLLFLIPGMNETLRVNGDARITVDAGLRERLAVDGKEPQSVTVVTVKAAYMHCAKAFMRSD
LWKPDTWYDRATLPTLGQILRDQLVVADSAEATDRWLDEEYKQTMW

Sequences:

>Translated_206_residues
MEFVTTHEELRTIYKTPRPTDGSIRKELKALDGHCRSFIGKSPFVLIGSSDGEGNADVTPKGDKPGFAAILDDRTIAIPD
RPGNNRLDTLENILRNPSVGLLFLIPGMNETLRVNGDARITVDAGLRERLAVDGKEPQSVTVVTVKAAYMHCAKAFMRSD
LWKPDTWYDRATLPTLGQILRDQLVVADSAEATDRWLDEEYKQTMW
>Mature_206_residues
MEFVTTHEELRTIYKTPRPTDGSIRKELKALDGHCRSFIGKSPFVLIGSSDGEGNADVTPKGDKPGFAAILDDRTIAIPD
RPGNNRLDTLENILRNPSVGLLFLIPGMNETLRVNGDARITVDAGLRERLAVDGKEPQSVTVVTVKAAYMHCAKAFMRSD
LWKPDTWYDRATLPTLGQILRDQLVVADSAEATDRWLDEEYKQTMW

Specific function: Unknown

COG id: COG3576

COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22986; Mature: 22986

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFVTTHEELRTIYKTPRPTDGSIRKELKALDGHCRSFIGKSPFVLIGSSDGEGNADVTP
CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
KGDKPGFAAILDDRTIAIPDRPGNNRLDTLENILRNPSVGLLFLIPGMNETLRVNGDARI
CCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCEEE
TVDAGLRERLAVDGKEPQSVTVVTVKAAYMHCAKAFMRSDLWKPDTWYDRATLPTLGQIL
EECCCCHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
RDQLVVADSAEATDRWLDEEYKQTMW
HHHEEECCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEFVTTHEELRTIYKTPRPTDGSIRKELKALDGHCRSFIGKSPFVLIGSSDGEGNADVTP
CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
KGDKPGFAAILDDRTIAIPDRPGNNRLDTLENILRNPSVGLLFLIPGMNETLRVNGDARI
CCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCEEE
TVDAGLRERLAVDGKEPQSVTVVTVKAAYMHCAKAFMRSDLWKPDTWYDRATLPTLGQIL
EECCCCHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
RDQLVVADSAEATDRWLDEEYKQTMW
HHHEEECCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA