| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473654
Identifier: 13473654
GI number: 13473654
Start: 3441134
End: 3441754
Strand: Direct
Name: 13473654
Synonym: mlr4322
Alternate gene names: NA
Gene position: 3441134-3441754 (Clockwise)
Preceding gene: 13473653
Following gene: 13473655
Centisome position: 48.91
GC content: 64.73
Gene sequence:
>621_bases ATGGAATTCGTCACCACGCACGAAGAGCTGAGGACGATCTACAAGACGCCACGGCCTACCGACGGTTCCATCCGCAAGGA GCTGAAGGCACTCGACGGCCACTGCCGCTCCTTCATCGGCAAGAGCCCCTTCGTGCTGATCGGCTCGTCCGACGGCGAAG GCAATGCCGACGTGACGCCGAAAGGTGACAAGCCGGGCTTCGCCGCCATTCTCGACGACAGGACCATCGCCATCCCCGAC CGGCCCGGCAACAACCGGCTGGACACGCTGGAGAACATCCTGCGCAATCCCTCGGTCGGACTGCTCTTCCTCATCCCCGG CATGAACGAGACGCTGCGCGTCAATGGCGATGCCCGCATCACCGTCGACGCCGGTTTGCGCGAGCGCCTCGCCGTCGACG GCAAGGAGCCGCAAAGCGTCACCGTGGTCACGGTCAAGGCGGCCTACATGCATTGCGCCAAGGCCTTCATGCGCTCCGAT CTGTGGAAGCCGGACACTTGGTACGACCGCGCGACGCTGCCGACGCTCGGCCAGATCCTGCGCGACCAGCTGGTGGTTGC CGATTCGGCCGAGGCGACCGACCGCTGGCTCGACGAGGAATACAAGCAGACGATGTGGTAG
Upstream 100 bases:
>100_bases GTTCACTTTCAGCCAGATGCCGCTGATCCTGCGCCATTCGCTGGACGACAAGGCAAGCGGGGAAGAGAAGGCTGGCAAGT AGGCAAACAGGGAGAGGGCC
Downstream 100 bases:
>100_bases GTTTCCCAGCGATTCGCGCCGGACCGATCCCACGCTGTGCTGAACCTTCTCGCCATCTCCGGCAGCCTGCGGGCCGCCTC CACCAATTCTGCCCTGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphohydrolase; Pyridoxamine 5-Phosphate Oxidase; Hydrolase; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5-Phosphate Oxidase-Related Protein; NTP Pyrophosphohydrolase; Pyridoxine Biosynthesis Protein; Phenylacetate-CoA Oxygenase/Reductase PaaK Subunit; Transcriptional Regulator AraC Family; Pyridoxamine 5-Phosphate Oxidase Family; Fmn Flavoprotein; Pyridoxamine 5\-Phosphate Oxidase Family Protein; Pyridoxamine 5-Phosphate Oxidase-Related
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MEFVTTHEELRTIYKTPRPTDGSIRKELKALDGHCRSFIGKSPFVLIGSSDGEGNADVTPKGDKPGFAAILDDRTIAIPD RPGNNRLDTLENILRNPSVGLLFLIPGMNETLRVNGDARITVDAGLRERLAVDGKEPQSVTVVTVKAAYMHCAKAFMRSD LWKPDTWYDRATLPTLGQILRDQLVVADSAEATDRWLDEEYKQTMW
Sequences:
>Translated_206_residues MEFVTTHEELRTIYKTPRPTDGSIRKELKALDGHCRSFIGKSPFVLIGSSDGEGNADVTPKGDKPGFAAILDDRTIAIPD RPGNNRLDTLENILRNPSVGLLFLIPGMNETLRVNGDARITVDAGLRERLAVDGKEPQSVTVVTVKAAYMHCAKAFMRSD LWKPDTWYDRATLPTLGQILRDQLVVADSAEATDRWLDEEYKQTMW >Mature_206_residues MEFVTTHEELRTIYKTPRPTDGSIRKELKALDGHCRSFIGKSPFVLIGSSDGEGNADVTPKGDKPGFAAILDDRTIAIPD RPGNNRLDTLENILRNPSVGLLFLIPGMNETLRVNGDARITVDAGLRERLAVDGKEPQSVTVVTVKAAYMHCAKAFMRSD LWKPDTWYDRATLPTLGQILRDQLVVADSAEATDRWLDEEYKQTMW
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22986; Mature: 22986
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFVTTHEELRTIYKTPRPTDGSIRKELKALDGHCRSFIGKSPFVLIGSSDGEGNADVTP CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC KGDKPGFAAILDDRTIAIPDRPGNNRLDTLENILRNPSVGLLFLIPGMNETLRVNGDARI CCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCEEE TVDAGLRERLAVDGKEPQSVTVVTVKAAYMHCAKAFMRSDLWKPDTWYDRATLPTLGQIL EECCCCHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH RDQLVVADSAEATDRWLDEEYKQTMW HHHEEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MEFVTTHEELRTIYKTPRPTDGSIRKELKALDGHCRSFIGKSPFVLIGSSDGEGNADVTP CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC KGDKPGFAAILDDRTIAIPDRPGNNRLDTLENILRNPSVGLLFLIPGMNETLRVNGDARI CCCCCCEEEEECCCEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCEEE TVDAGLRERLAVDGKEPQSVTVVTVKAAYMHCAKAFMRSDLWKPDTWYDRATLPTLGQIL EECCCCHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH RDQLVVADSAEATDRWLDEEYKQTMW HHHEEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA