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The map label for this gene is yjfR [C]

Identifier: 13473647

GI number: 13473647

Start: 3434107

End: 3435159

Strand: Direct

Name: yjfR [C]

Synonym: mlr4314

Alternate gene names: 13473647

Gene position: 3434107-3435159 (Clockwise)

Preceding gene: 13473646

Following gene: 13473649

Centisome position: 48.81

GC content: 65.72

Gene sequence:

>1053_bases
ATGTCTAGGGGCCGAAACCCGCTGGAGCATACCTTGGCCGCGAGAAAGAAAGCCGCCAACCGCTATTACAGCGGTCCGCC
CAGCGACCATTTCGATGGCACCTTGTTCTTCAACCCCGGCGGCCAGATGCCCGGCCGCTTCACCGATCTGCTGAAATGGC
AGTTCAACGGCCAACGCGCGAAATGGCCAGCGACCAGCCCGAGCCCCTTTCCGCAGGCAAGGCCCGCCGCGAAGGTCGAA
GGCACCGACCTCACCGTAACCATGGTCGGCCATTCGACCTTGCTGATCCAGACGGCCGGGCTGAACATCCTCACCGACCC
GGTCTGGTCGCAACGCACCTCGCCGTTTTCCTTCGCCGGGCCAAAACGCGTCAATGCGCCGGGCATCGTCTTCGACGATC
TGCCGCCGATCGACCTCGTGCTGGTCAGCCACAACCATTACGACCATCTCGACCTCGCCACGCTGAAGCGGCTGAAGGAG
AAGCACGATCCGCTGGTGGTGACGCCGCTCGGCAACGATGTGCTGATCGGCGAGGCGGTTCCCGATATGCGGCTTTCGGC
GCATGACTGGGGAGACAAGGTCGACATCGCTGACCGCGCCGCCATCCACATCGAGCCGGCGCATCACTGGTCGGCGCGCG
GCGCCCGCGACCGGCGCATGGCGCTGTGGGCCGGCTTCGTCATCGAGACGCCGGGCGGCAAACTCTATTTCGCCGGGGAT
ACCGGCTTCCACGACGGCATCAACTACCGGCTGATGGCGGACAAACATGGCGGCTTCCGCTTCGCCATCCTGCCGATCGG
CGCCTATGAGCCGCGCTGGTTCATGGCGCCGCAGCACCAGAACCCCAGGGAAGCGGTGCAAGGCATGAAGCTATGCAAGG
CCGCCTTCGCCGCCGGCTGCCACTGGGGCACTTTCCACCTCACCGACGAACCGATGGACGAGCCGGTCCGCAAACTGGCC
GAGGCGCTGGACGCCGAGGGCCTGCCGCAGGAGCGCTTTCGCGCCTTGCAACCCGGCGAGGTTTGGGACGTGCCGGAGAT
CGACCACCGCTGA

Upstream 100 bases:

>100_bases
AATCTCAACCTGCCATGTCCGCTCGCCGCTCAAATCCGTGGAGTTCGGCCGCGACCGCGCATTCGCCCTGCAAATGCTTG
CACCAACCGGCGCAACGCCT

Downstream 100 bases:

>100_bases
AGTCTGCATTGGCCATTTACGGCACCATCATTTTCGCCGATGGTCCGCCCAGCAAAAAAGGGAATGCAGATGAAATCTAT
CCTTGCAGCGCTGATGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MSRGRNPLEHTLAARKKAANRYYSGPPSDHFDGTLFFNPGGQMPGRFTDLLKWQFNGQRAKWPATSPSPFPQARPAAKVE
GTDLTVTMVGHSTLLIQTAGLNILTDPVWSQRTSPFSFAGPKRVNAPGIVFDDLPPIDLVLVSHNHYDHLDLATLKRLKE
KHDPLVVTPLGNDVLIGEAVPDMRLSAHDWGDKVDIADRAAIHIEPAHHWSARGARDRRMALWAGFVIETPGGKLYFAGD
TGFHDGINYRLMADKHGGFRFAILPIGAYEPRWFMAPQHQNPREAVQGMKLCKAAFAAGCHWGTFHLTDEPMDEPVRKLA
EALDAEGLPQERFRALQPGEVWDVPEIDHR

Sequences:

>Translated_350_residues
MSRGRNPLEHTLAARKKAANRYYSGPPSDHFDGTLFFNPGGQMPGRFTDLLKWQFNGQRAKWPATSPSPFPQARPAAKVE
GTDLTVTMVGHSTLLIQTAGLNILTDPVWSQRTSPFSFAGPKRVNAPGIVFDDLPPIDLVLVSHNHYDHLDLATLKRLKE
KHDPLVVTPLGNDVLIGEAVPDMRLSAHDWGDKVDIADRAAIHIEPAHHWSARGARDRRMALWAGFVIETPGGKLYFAGD
TGFHDGINYRLMADKHGGFRFAILPIGAYEPRWFMAPQHQNPREAVQGMKLCKAAFAAGCHWGTFHLTDEPMDEPVRKLA
EALDAEGLPQERFRALQPGEVWDVPEIDHR
>Mature_349_residues
SRGRNPLEHTLAARKKAANRYYSGPPSDHFDGTLFFNPGGQMPGRFTDLLKWQFNGQRAKWPATSPSPFPQARPAAKVEG
TDLTVTMVGHSTLLIQTAGLNILTDPVWSQRTSPFSFAGPKRVNAPGIVFDDLPPIDLVLVSHNHYDHLDLATLKRLKEK
HDPLVVTPLGNDVLIGEAVPDMRLSAHDWGDKVDIADRAAIHIEPAHHWSARGARDRRMALWAGFVIETPGGKLYFAGDT
GFHDGINYRLMADKHGGFRFAILPIGAYEPRWFMAPQHQNPREAVQGMKLCKAAFAAGCHWGTFHLTDEPMDEPVRKLAE
ALDAEGLPQERFRALQPGEVWDVPEIDHR

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To K.pneumoniae romA [H]

Homologues:

Organism=Homo sapiens, GI170932483, Length=267, Percent_Identity=37.4531835205993, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI170932481, Length=267, Percent_Identity=37.4531835205993, Blast_Score=174, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17543102, Length=276, Percent_Identity=38.4057971014493, Blast_Score=195, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17543100, Length=276, Percent_Identity=38.4057971014493, Blast_Score=195, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI25148824, Length=276, Percent_Identity=38.4057971014493, Blast_Score=195, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17543104, Length=274, Percent_Identity=39.051094890511, Blast_Score=180, Evalue=8e-46,
Organism=Saccharomyces cerevisiae, GI6325154, Length=245, Percent_Identity=35.9183673469388, Blast_Score=136, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38974; Mature: 38842

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRGRNPLEHTLAARKKAANRYYSGPPSDHFDGTLFFNPGGQMPGRFTDLLKWQFNGQRA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHEEEEECCCEE
KWPATSPSPFPQARPAAKVEGTDLTVTMVGHSTLLIQTAGLNILTDPVWSQRTSPFSFAG
ECCCCCCCCCCCCCCCCEECCCEEEEEEECCEEEEEEECCCCEEECCCHHCCCCCCCCCC
PKRVNAPGIVFDDLPPIDLVLVSHNHYDHLDLATLKRLKEKHDPLVVTPLGNDVLIGEAV
CCCCCCCCEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEECCC
PDMRLSAHDWGDKVDIADRAAIHIEPAHHWSARGARDRRMALWAGFVIETPGGKLYFAGD
CCCEEECCCCCCEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEECC
TGFHDGINYRLMADKHGGFRFAILPIGAYEPRWFMAPQHQNPREAVQGMKLCKAAFAAGC
CCCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCC
HWGTFHLTDEPMDEPVRKLAEALDAEGLPQERFRALQPGEVWDVPEIDHR
CCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRGRNPLEHTLAARKKAANRYYSGPPSDHFDGTLFFNPGGQMPGRFTDLLKWQFNGQRA
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHEEEEECCCEE
KWPATSPSPFPQARPAAKVEGTDLTVTMVGHSTLLIQTAGLNILTDPVWSQRTSPFSFAG
ECCCCCCCCCCCCCCCCEECCCEEEEEEECCEEEEEEECCCCEEECCCHHCCCCCCCCCC
PKRVNAPGIVFDDLPPIDLVLVSHNHYDHLDLATLKRLKEKHDPLVVTPLGNDVLIGEAV
CCCCCCCCEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEECCC
PDMRLSAHDWGDKVDIADRAAIHIEPAHHWSARGARDRRMALWAGFVIETPGGKLYFAGD
CCCEEECCCCCCEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEECC
TGFHDGINYRLMADKHGGFRFAILPIGAYEPRWFMAPQHQNPREAVQGMKLCKAAFAAGC
CCCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCC
HWGTFHLTDEPMDEPVRKLAEALDAEGLPQERFRALQPGEVWDVPEIDHR
CCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]