| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473646
Identifier: 13473646
GI number: 13473646
Start: 3433785
End: 3434114
Strand: Direct
Name: 13473646
Synonym: mlr4313
Alternate gene names: NA
Gene position: 3433785-3434114 (Clockwise)
Preceding gene: 13473643
Following gene: 13473647
Centisome position: 48.8
GC content: 55.76
Gene sequence:
>330_bases ATGGACGAGAAGCGTGAGGTTGAGCAACCGCTCGCAACGAGCGCCGCCAGCGATACGGCCACAAGACCGCTTTTCGAAAA ATTCATTACAACCTCCGTCGGATCCGGCTGGGGGGAAGCCGTCCGCGCAATATCACCTCCCACCAAGATGGAGAAGGTGG CGAAATTTCAACCCGATATGGTTAAAATAGGGTTTGCGGCAAGATTGTTGCAAATTTATCGCAATCTCAACCTGCCATGT CCGCTCGCCGCTCAAATCCGTGGAGTTCGGCCGCGACCGCGCATTCGCCCTGCAAATGCTTGCACCAACCGGCGCAACGC CTATGTCTAG
Upstream 100 bases:
>100_bases CGACGGGTCGGTGCTGCCGGGCGAGGCCGGCGGCGGCAGCTGATTGGAGGTCACCTGGCCGGCCGGCGCCGGCTGCAGCG GCGCCGGTTGCTGGTCGTCC
Downstream 100 bases:
>100_bases GGGCCGAAACCCGCTGGAGCATACCTTGGCCGCGAGAAAGAAAGCCGCCAACCGCTATTACAGCGGTCCGCCCAGCGACC ATTTCGATGGCACCTTGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MDEKREVEQPLATSAASDTATRPLFEKFITTSVGSGWGEAVRAISPPTKMEKVAKFQPDMVKIGFAARLLQIYRNLNLPC PLAAQIRGVRPRPRIRPANACTNRRNAYV
Sequences:
>Translated_109_residues MDEKREVEQPLATSAASDTATRPLFEKFITTSVGSGWGEAVRAISPPTKMEKVAKFQPDMVKIGFAARLLQIYRNLNLPC PLAAQIRGVRPRPRIRPANACTNRRNAYV >Mature_109_residues MDEKREVEQPLATSAASDTATRPLFEKFITTSVGSGWGEAVRAISPPTKMEKVAKFQPDMVKIGFAARLLQIYRNLNLPC PLAAQIRGVRPRPRIRPANACTNRRNAYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12125; Mature: 12125
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEKREVEQPLATSAASDTATRPLFEKFITTSVGSGWGEAVRAISPPTKMEKVAKFQPDM CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCH VKIGFAARLLQIYRNLNLPCPLAAQIRGVRPRPRIRPANACTNRRNAYV HHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure MDEKREVEQPLATSAASDTATRPLFEKFITTSVGSGWGEAVRAISPPTKMEKVAKFQPDM CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCH VKIGFAARLLQIYRNLNLPCPLAAQIRGVRPRPRIRPANACTNRRNAYV HHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA