Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13473646

Identifier: 13473646

GI number: 13473646

Start: 3433785

End: 3434114

Strand: Direct

Name: 13473646

Synonym: mlr4313

Alternate gene names: NA

Gene position: 3433785-3434114 (Clockwise)

Preceding gene: 13473643

Following gene: 13473647

Centisome position: 48.8

GC content: 55.76

Gene sequence:

>330_bases
ATGGACGAGAAGCGTGAGGTTGAGCAACCGCTCGCAACGAGCGCCGCCAGCGATACGGCCACAAGACCGCTTTTCGAAAA
ATTCATTACAACCTCCGTCGGATCCGGCTGGGGGGAAGCCGTCCGCGCAATATCACCTCCCACCAAGATGGAGAAGGTGG
CGAAATTTCAACCCGATATGGTTAAAATAGGGTTTGCGGCAAGATTGTTGCAAATTTATCGCAATCTCAACCTGCCATGT
CCGCTCGCCGCTCAAATCCGTGGAGTTCGGCCGCGACCGCGCATTCGCCCTGCAAATGCTTGCACCAACCGGCGCAACGC
CTATGTCTAG

Upstream 100 bases:

>100_bases
CGACGGGTCGGTGCTGCCGGGCGAGGCCGGCGGCGGCAGCTGATTGGAGGTCACCTGGCCGGCCGGCGCCGGCTGCAGCG
GCGCCGGTTGCTGGTCGTCC

Downstream 100 bases:

>100_bases
GGGCCGAAACCCGCTGGAGCATACCTTGGCCGCGAGAAAGAAAGCCGCCAACCGCTATTACAGCGGTCCGCCCAGCGACC
ATTTCGATGGCACCTTGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MDEKREVEQPLATSAASDTATRPLFEKFITTSVGSGWGEAVRAISPPTKMEKVAKFQPDMVKIGFAARLLQIYRNLNLPC
PLAAQIRGVRPRPRIRPANACTNRRNAYV

Sequences:

>Translated_109_residues
MDEKREVEQPLATSAASDTATRPLFEKFITTSVGSGWGEAVRAISPPTKMEKVAKFQPDMVKIGFAARLLQIYRNLNLPC
PLAAQIRGVRPRPRIRPANACTNRRNAYV
>Mature_109_residues
MDEKREVEQPLATSAASDTATRPLFEKFITTSVGSGWGEAVRAISPPTKMEKVAKFQPDMVKIGFAARLLQIYRNLNLPC
PLAAQIRGVRPRPRIRPANACTNRRNAYV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12125; Mature: 12125

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKREVEQPLATSAASDTATRPLFEKFITTSVGSGWGEAVRAISPPTKMEKVAKFQPDM
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCH
VKIGFAARLLQIYRNLNLPCPLAAQIRGVRPRPRIRPANACTNRRNAYV
HHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MDEKREVEQPLATSAASDTATRPLFEKFITTSVGSGWGEAVRAISPPTKMEKVAKFQPDM
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCH
VKIGFAARLLQIYRNLNLPCPLAAQIRGVRPRPRIRPANACTNRRNAYV
HHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA