Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13473554

Identifier: 13473554

GI number: 13473554

Start: 3348928

End: 3349269

Strand: Direct

Name: 13473554

Synonym: mlr4196

Alternate gene names: NA

Gene position: 3348928-3349269 (Clockwise)

Preceding gene: 13473553

Following gene: 13473555

Centisome position: 47.6

GC content: 64.62

Gene sequence:

>342_bases
ATGTCGACACCGCACTGGCCGCAGGCCTCGAACGTGGAACTGGAGGATTGGGGCGCAGGCAGCAACACGCTTGCCGGCGC
GCCGCGCGCCTCCGGCAAGATCCTGTCGCAGAACCCGGACGGATCGAGTGAATGCGGCCTGTGGTCGTGCACGCCGGGCA
CCCGCAAGGTCACCTTCGCCGCCGACGAGTTCTGTCATTTCCTGTCGGGTCACGGCAGCTATGTCCATGACAATGGCGAA
CAGATTCCGGTCGAGGCCGGCACGCTGGTGTTCTTTCCCGCCGGCTGGACCGGCATCTCCATCATCACGCAAACGCTGAC
CAAGGCCTTCATGTGCCGGTGA

Upstream 100 bases:

>100_bases
CCATGCGCAACGTCTACATGCTGGCCTGAGAAGCATGATCCCGAAAAGTGGGAACCGGTTTTCGGACGAGATCATGCTTA
AGCAAGAATCGGAGCAAGAC

Downstream 100 bases:

>100_bases
GCATCATTTCAAGGAATTCGATATGACGACGCCAATCATGCAATCGCCGCTCGCCATCACCGGCCTCGTCGACTGGGGTG
TCATCCCGACGATGATCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSTPHWPQASNVELEDWGAGSNTLAGAPRASGKILSQNPDGSSECGLWSCTPGTRKVTFAADEFCHFLSGHGSYVHDNGE
QIPVEAGTLVFFPAGWTGISIITQTLTKAFMCR

Sequences:

>Translated_113_residues
MSTPHWPQASNVELEDWGAGSNTLAGAPRASGKILSQNPDGSSECGLWSCTPGTRKVTFAADEFCHFLSGHGSYVHDNGE
QIPVEAGTLVFFPAGWTGISIITQTLTKAFMCR
>Mature_112_residues
STPHWPQASNVELEDWGAGSNTLAGAPRASGKILSQNPDGSSECGLWSCTPGTRKVTFAADEFCHFLSGHGSYVHDNGEQ
IPVEAGTLVFFPAGWTGISIITQTLTKAFMCR

Specific function: Unknown

COG id: COG3450

COG function: function code R; Predicted enzyme of the cupin superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12044; Mature: 11913

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPHWPQASNVELEDWGAGSNTLAGAPRASGKILSQNPDGSSECGLWSCTPGTRKVTFA
CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCEEEEEE
ADEFCHFLSGHGSYVHDNGEQIPVEAGTLVFFPAGWTGISIITQTLTKAFMCR
HHHHHHHHCCCCCEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STPHWPQASNVELEDWGAGSNTLAGAPRASGKILSQNPDGSSECGLWSCTPGTRKVTFA
CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCEEEEEE
ADEFCHFLSGHGSYVHDNGEQIPVEAGTLVFFPAGWTGISIITQTLTKAFMCR
HHHHHHHHCCCCCEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA