| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473553
Identifier: 13473553
GI number: 13473553
Start: 3348506
End: 3348856
Strand: Direct
Name: 13473553
Synonym: mlr4195
Alternate gene names: NA
Gene position: 3348506-3348856 (Clockwise)
Preceding gene: 13473552
Following gene: 13473554
Centisome position: 47.59
GC content: 67.81
Gene sequence:
>351_bases GTGACCTCCTCCGCCCCACACCTCTATCAGGCCTCCACCCGCACCGATCTCGCCGACTGGGGCACCCAGCCTGACGTGCT GGACGGCGCCTCGCACTCCACCGGCAGGCTGGTGCACAAGGGACCCAACAACCAGCCGGAATCCGGCATCTGGGTCTGCA CGCCGGGCCGCTGGCGGCTCTCGATCCCGCGCGATGAATTGTGCCATTTCGTCGCCGGCCGCGCGACCTACCGCTCGGAT GTCGGCGAGGTGATAGAAGTCTCGGCCGGGACCGTGGTCATGTTCCCCGCCGGCTGGACGGGCGAGTGCACGGTGCATGA GACCATGCGCAACGTCTACATGCTGGCCTGA
Upstream 100 bases:
>100_bases TGACCGATCCCCGGATGAAGGCGAAGCTGGCGAAGACATCGGCACAGATGCACGCGCAGAACGGGCCTGAGAAGGCTGCC GGCTTGCTGGAGGCGTTGCT
Downstream 100 bases:
>100_bases GAAGCATGATCCCGAAAAGTGGGAACCGGTTTTCGGACGAGATCATGCTTAAGCAAGAATCGGAGCAAGACATGTCGACA CCGCACTGGCCGCAGGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MTSSAPHLYQASTRTDLADWGTQPDVLDGASHSTGRLVHKGPNNQPESGIWVCTPGRWRLSIPRDELCHFVAGRATYRSD VGEVIEVSAGTVVMFPAGWTGECTVHETMRNVYMLA
Sequences:
>Translated_116_residues MTSSAPHLYQASTRTDLADWGTQPDVLDGASHSTGRLVHKGPNNQPESGIWVCTPGRWRLSIPRDELCHFVAGRATYRSD VGEVIEVSAGTVVMFPAGWTGECTVHETMRNVYMLA >Mature_115_residues TSSAPHLYQASTRTDLADWGTQPDVLDGASHSTGRLVHKGPNNQPESGIWVCTPGRWRLSIPRDELCHFVAGRATYRSDV GEVIEVSAGTVVMFPAGWTGECTVHETMRNVYMLA
Specific function: Unknown
COG id: COG3450
COG function: function code R; Predicted enzyme of the cupin superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12701; Mature: 12570
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSAPHLYQASTRTDLADWGTQPDVLDGASHSTGRLVHKGPNNQPESGIWVCTPGRWRL CCCCCCCEEECCCCCCHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCEEE SIPRDELCHFVAGRATYRSDVGEVIEVSAGTVVMFPAGWTGECTVHETMRNVYMLA ECCHHHHHHHHHCCCHHHHCCCCEEEECCCEEEEECCCCCCCEEHHHHHHHHEECC >Mature Secondary Structure TSSAPHLYQASTRTDLADWGTQPDVLDGASHSTGRLVHKGPNNQPESGIWVCTPGRWRL CCCCCCEEECCCCCCHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCEEE SIPRDELCHFVAGRATYRSDVGEVIEVSAGTVVMFPAGWTGECTVHETMRNVYMLA ECCHHHHHHHHHCCCHHHHCCCCEEEECCCEEEEECCCCCCCEEHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA