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The map label for this gene is potC [H]

Identifier: 13473550

GI number: 13473550

Start: 3345360

End: 3346154

Strand: Direct

Name: potC [H]

Synonym: mlr4192

Alternate gene names: 13473550

Gene position: 3345360-3346154 (Clockwise)

Preceding gene: 13473549

Following gene: 13473551

Centisome position: 47.55

GC content: 63.77

Gene sequence:

>795_bases
ATGGCTGAGCGCTCCCCTGCGACGCGGCGCACGCTGTGGCTCGTGCTGAGCCTGGTCTTCGCCTTCCTCTACATCCCGAT
CGCCGTGCTGGTGGCGCTCTCCTTCAACGAAGGCGGGCTGCCCACGGCATGGTCTGGCTTCTCGCTGAAATGGTACGCCT
CGCTGGCCAACAATTCAGCGATCCTGTCGGCCGCGCTCAACACGCTGATCGTGGCGCTGGTCTCCACCGCCATCGCCACC
TTGCTCGGCACGCTGCTGGCGATCGGTGTCGAGATGCGCCGGCAATACGGCAAGGGGCTCGAAGCCTTGATCTTCGCGCC
GATGATCATCCCCGACATCGTGCTGGCAATCGCGCTGCTGTCGTTCTTTTCGATGCTCAATTTGACCATGGGCCTGCACA
CCATCATCCTCGCCCATGTCGTGTTCAACCTGGCCTTCGTCTGCTCTGTGGTGCGCGCGCGGCTGAAGAGTTTCGACTGG
TCGATCGTCGAGGCTTCCGCCGACCTTGGCGCCTCCGCAATCACCACCTTCCGGCGCGTGACCTTGCCGGTCATCGCGCC
GGCCGTGATCGCCGGCGCGCTGCTTGCCTTCACGCTGTCGGTCGACGAGTTCATCATCGCCTTCTTCACCGCAGGCGCCG
GCCGCGCTTCGACCACGCTGCCTATGCAGATCTACGCCATGATCCGCTTCGGCATCACGCCTGAGATCAACGCGCTGGCG
ACCATCTTCATGGCCGTGAGCATCACCGCGCTGACCCTGTCCCAGCGGCTGAACAAGGGAGTGATCGGCCAATGA

Upstream 100 bases:

>100_bases
GCCATGGCGCTGATCGCCATCATGCTGCTGGTGCTGATGGCGCAGGCGCTCGCGGCCGACCGCGCCTCGGGGCGTGCGGC
GCAGGCCGTGGGAGGCACTG

Downstream 100 bases:

>100_bases
GCGAACCGCGCACGCTGTTGGCCATCGATCATGTTTCGAAGAATTTCGGCCGGGTCACTGCCGTCGATGGCATCTCGCTT
GATATCCGCGAGAACGAATT

Product: spermidine/putrescine ABC transporter, permease protein

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MAERSPATRRTLWLVLSLVFAFLYIPIAVLVALSFNEGGLPTAWSGFSLKWYASLANNSAILSAALNTLIVALVSTAIAT
LLGTLLAIGVEMRRQYGKGLEALIFAPMIIPDIVLAIALLSFFSMLNLTMGLHTIILAHVVFNLAFVCSVVRARLKSFDW
SIVEASADLGASAITTFRRVTLPVIAPAVIAGALLAFTLSVDEFIIAFFTAGAGRASTTLPMQIYAMIRFGITPEINALA
TIFMAVSITALTLSQRLNKGVIGQ

Sequences:

>Translated_264_residues
MAERSPATRRTLWLVLSLVFAFLYIPIAVLVALSFNEGGLPTAWSGFSLKWYASLANNSAILSAALNTLIVALVSTAIAT
LLGTLLAIGVEMRRQYGKGLEALIFAPMIIPDIVLAIALLSFFSMLNLTMGLHTIILAHVVFNLAFVCSVVRARLKSFDW
SIVEASADLGASAITTFRRVTLPVIAPAVIAGALLAFTLSVDEFIIAFFTAGAGRASTTLPMQIYAMIRFGITPEINALA
TIFMAVSITALTLSQRLNKGVIGQ
>Mature_263_residues
AERSPATRRTLWLVLSLVFAFLYIPIAVLVALSFNEGGLPTAWSGFSLKWYASLANNSAILSAALNTLIVALVSTAIATL
LGTLLAIGVEMRRQYGKGLEALIFAPMIIPDIVLAIALLSFFSMLNLTMGLHTIILAHVVFNLAFVCSVVRARLKSFDWS
IVEASADLGASAITTFRRVTLPVIAPAVIAGALLAFTLSVDEFIIAFFTAGAGRASTTLPMQIYAMIRFGITPEINALAT
IFMAVSITALTLSQRLNKGVIGQ

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=223, Percent_Identity=41.2556053811659, Blast_Score=178, Evalue=3e-46,
Organism=Escherichia coli, GI1787081, Length=246, Percent_Identity=42.2764227642276, Blast_Score=160, Evalue=6e-41,
Organism=Escherichia coli, GI1787714, Length=230, Percent_Identity=38.695652173913, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1788764, Length=232, Percent_Identity=28.0172413793103, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28196; Mature: 28065

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERSPATRRTLWLVLSLVFAFLYIPIAVLVALSFNEGGLPTAWSGFSLKWYASLANNSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHH
ILSAALNTLIVALVSTAIATLLGTLLAIGVEMRRQYGKGLEALIFAPMIIPDIVLAIALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SFFSMLNLTMGLHTIILAHVVFNLAFVCSVVRARLKSFDWSIVEASADLGASAITTFRRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCHHCCHHHHHHHHHH
TLPVIAPAVIAGALLAFTLSVDEFIIAFFTAGAGRASTTLPMQIYAMIRFGITPEINALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
TIFMAVSITALTLSQRLNKGVIGQ
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AERSPATRRTLWLVLSLVFAFLYIPIAVLVALSFNEGGLPTAWSGFSLKWYASLANNSA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHH
ILSAALNTLIVALVSTAIATLLGTLLAIGVEMRRQYGKGLEALIFAPMIIPDIVLAIALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SFFSMLNLTMGLHTIILAHVVFNLAFVCSVVRARLKSFDWSIVEASADLGASAITTFRRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCHHCCHHHHHHHHHH
TLPVIAPAVIAGALLAFTLSVDEFIIAFFTAGAGRASTTLPMQIYAMIRFGITPEINALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
TIFMAVSITALTLSQRLNKGVIGQ
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]