| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473538
Identifier: 13473538
GI number: 13473538
Start: 3333277
End: 3334308
Strand: Reverse
Name: 13473538
Synonym: mll4178
Alternate gene names: NA
Gene position: 3334308-3333277 (Counterclockwise)
Preceding gene: 13473539
Following gene: 13473537
Centisome position: 47.39
GC content: 62.11
Gene sequence:
>1032_bases ATGGAAAACCGGAAGAACAAATTTTCCTCGACACGCGAAGGGATTTCGCGGCGCAACGTGCTGGAGCTGGGTGCGCTTGG CCTGGCTGCTGCGATGCTGCCGGGTGCGGCCTTCGCCAAGGACAAGAAACTGAAGGTTGCGGCGATCTTCGCCACGCCGA TCGAGGAGCCCTGGGATAACCAGATCCATGTCGCCCTGCAGAAGGCGGAGAAGGAACTCGGCATCGAATACAAATGGTCG GAAAAGGTGCAGACCGCCGACTTCAGCCGCGTCATGCGCGAATATGCGCAAGGCGGCTACCAACTGGTGCTGGGCGACGC CTTCGCCGCCGAGCGTGAATCGCGCCGCACCGCCAAGCAGTTCCCGAAGACCGCCTGGCTGTTCGGTTCTGGCGCTGGTC CGGCCGAACCCAATTTCGGCGTCTTCGACAACTGGATCCATGAGCCCGCCTATCTCGCCGGAATGATCGCCGGCAAGATG TCGAAGTCGGGCACGGTGGGCGCCGTCGCGGCGATGGGCATTCCGGAAGTGAACCGGCTGGTCAACGCCTTCTTTGCCGG CGCCAAGGAGGTCAACCCGAACGTCAAGAAGAAGGTCGCCTTCATCGGCTCCTTCTTCGATCCGCCGAAGGCCAAGGAAG CCGCGGTCGCGCAGATCGATGCCGGGGTCGACGTCATCTATGCCGAGCGCTTCGGCGTCATCGAGGCGGCGGTGGAGAAG AAGATCCTCGCCATCTCCAACATGTCGGACCAGTCGAGCCTCGGCCCCGACACGGTCATCACCGGCCCGGTGTGGGATAT GTACCCGACGGTCGAACAGGCGATCAAGCTGGTCAAGGCCGGCGTCTACACCGCGCAGGACTATGGCGATTTCTCACGCA TGGCCAAGGGCGGTTCCTACCTCGCCCCCTACCACAAGTTCGACAAGACGCTGCCGGCCGAGGTCAAGGATCTGGTCGAG AAGAAGAAGGCGGAGATTCTCGAGGGCAATTTCCGGGTGGATGTCGACGAGAACACGCCGGTTTCGGATTGA
Upstream 100 bases:
>100_bases AATTTGACCATGTGGACAAAAGTCCGGACCCGTTCCATAGTTCCCCGTCTGATTTTTAGAACGGCCGGCTCGACACGGCT GTCAAACAGAGGGGACTGCA
Downstream 100 bases:
>100_bases GGCTTGCTTACCCTCCCCCTTGTGGGGAGGGTCGATCCGCGAAGCGGAGCGGGGCGGGGGTTTTCAGCGCCGTACCCCCA CCCCGTCTCACGATCTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Bmp Family Protein; Basic Membrane Protein; Lipoprotein; Bmp Family Membrane Protein; Basic Membrane Protein Family Protein; ABC Transporter Periplasmic/Surface Lipoprotein; Outer Membrane Lipoprotein; ABC Transporter; Lipoprotein Periplasmic Protein; Membrane Lipoprotein; ABC Transporter Periplasmic Protein Surface Lipoprotein; Lipoprotein Bmp Family; ABC Transporter Periplasmic Protein/Surface Lipoprotein; Twin-Arginine Translocation Pathway Signal; Tat Pathway Signal Sequence/Basic Membrane Protein; Bmp Family Lipoprotein; Surface Lipoprotein; Signal Peptide Protein; ABC Transporter Periplasmic Protein; ABC-Type Transport Periplasmic Component; Med/BMP Family Lipoprotein
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MENRKNKFSSTREGISRRNVLELGALGLAAAMLPGAAFAKDKKLKVAAIFATPIEEPWDNQIHVALQKAEKELGIEYKWS EKVQTADFSRVMREYAQGGYQLVLGDAFAAERESRRTAKQFPKTAWLFGSGAGPAEPNFGVFDNWIHEPAYLAGMIAGKM SKSGTVGAVAAMGIPEVNRLVNAFFAGAKEVNPNVKKKVAFIGSFFDPPKAKEAAVAQIDAGVDVIYAERFGVIEAAVEK KILAISNMSDQSSLGPDTVITGPVWDMYPTVEQAIKLVKAGVYTAQDYGDFSRMAKGGSYLAPYHKFDKTLPAEVKDLVE KKKAEILEGNFRVDVDENTPVSD
Sequences:
>Translated_343_residues MENRKNKFSSTREGISRRNVLELGALGLAAAMLPGAAFAKDKKLKVAAIFATPIEEPWDNQIHVALQKAEKELGIEYKWS EKVQTADFSRVMREYAQGGYQLVLGDAFAAERESRRTAKQFPKTAWLFGSGAGPAEPNFGVFDNWIHEPAYLAGMIAGKM SKSGTVGAVAAMGIPEVNRLVNAFFAGAKEVNPNVKKKVAFIGSFFDPPKAKEAAVAQIDAGVDVIYAERFGVIEAAVEK KILAISNMSDQSSLGPDTVITGPVWDMYPTVEQAIKLVKAGVYTAQDYGDFSRMAKGGSYLAPYHKFDKTLPAEVKDLVE KKKAEILEGNFRVDVDENTPVSD >Mature_343_residues MENRKNKFSSTREGISRRNVLELGALGLAAAMLPGAAFAKDKKLKVAAIFATPIEEPWDNQIHVALQKAEKELGIEYKWS EKVQTADFSRVMREYAQGGYQLVLGDAFAAERESRRTAKQFPKTAWLFGSGAGPAEPNFGVFDNWIHEPAYLAGMIAGKM SKSGTVGAVAAMGIPEVNRLVNAFFAGAKEVNPNVKKKVAFIGSFFDPPKAKEAAVAQIDAGVDVIYAERFGVIEAAVEK KILAISNMSDQSSLGPDTVITGPVWDMYPTVEQAIKLVKAGVYTAQDYGDFSRMAKGGSYLAPYHKFDKTLPAEVKDLVE KKKAEILEGNFRVDVDENTPVSD
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37364; Mature: 37364
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENRKNKFSSTREGISRRNVLELGALGLAAAMLPGAAFAKDKKLKVAAIFATPIEEPWDN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEEECCCCCCCCC QIHVALQKAEKELGIEYKWSEKVQTADFSRVMREYAQGGYQLVLGDAFAAERESRRTAKQ HHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHH FPKTAWLFGSGAGPAEPNFGVFDNWIHEPAYLAGMIAGKMSKSGTVGAVAAMGIPEVNRL CCCEEEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHH VNAFFAGAKEVNPNVKKKVAFIGSFFDPPKAKEAAVAQIDAGVDVIYAERFGVIEAAVEK HHHHHCCCHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHH KILAISNMSDQSSLGPDTVITGPVWDMYPTVEQAIKLVKAGVYTAQDYGDFSRMAKGGSY HHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC LAPYHKFDKTLPAEVKDLVEKKKAEILEGNFRVDVDENTPVSD CCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC >Mature Secondary Structure MENRKNKFSSTREGISRRNVLELGALGLAAAMLPGAAFAKDKKLKVAAIFATPIEEPWDN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEEECCCCCCCCC QIHVALQKAEKELGIEYKWSEKVQTADFSRVMREYAQGGYQLVLGDAFAAERESRRTAKQ HHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHH FPKTAWLFGSGAGPAEPNFGVFDNWIHEPAYLAGMIAGKMSKSGTVGAVAAMGIPEVNRL CCCEEEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHH VNAFFAGAKEVNPNVKKKVAFIGSFFDPPKAKEAAVAQIDAGVDVIYAERFGVIEAAVEK HHHHHCCCHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHH KILAISNMSDQSSLGPDTVITGPVWDMYPTVEQAIKLVKAGVYTAQDYGDFSRMAKGGSY HHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC LAPYHKFDKTLPAEVKDLVEKKKAEILEGNFRVDVDENTPVSD CCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA