Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13473526

Identifier: 13473526

GI number: 13473526

Start: 3323196

End: 3323435

Strand: Direct

Name: 13473526

Synonym: msr4160

Alternate gene names: NA

Gene position: 3323196-3323435 (Clockwise)

Preceding gene: 13473525

Following gene: 13473531

Centisome position: 47.23

GC content: 61.25

Gene sequence:

>240_bases
GTGGCAAATCAGTCCCTACGCCAGTCAGAGATCGATAGCCTTCAATATATCGCGACGATGAGCAACGAGCTCGTGCAGAT
GGCCGAAGCAAGCCGTTTTCCCATGATCTCCTACCTGCTCGGCATGGCCTATGCCGAAGCCTTCGACGTGCTGCGCGGCG
CGCGGCCGGCAAGGCATGCGCAGCTCAGCGGCAACCCGATGCATGCCAAGCCGAAGGACGCTCAGCCACGCAGAGCGTAG

Upstream 100 bases:

>100_bases
AAGCCCGCATTCGGCGGGTCAATCTATTAATTAGCCGTCTTAGTATGTCCGTAGCAGCCAGTACGCGTCCCTGAGTTCCA
CCAGATGACAGGAGAAGCAC

Downstream 100 bases:

>100_bases
CGGATGCAACCCTGTGCGCGCCGGCGCCGTGATCCCTGCCTTGATCGCCCGCGGCCCGCAAATGGACGCCTATGCATAGA
GATTCGAGGGGGATCCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MANQSLRQSEIDSLQYIATMSNELVQMAEASRFPMISYLLGMAYAEAFDVLRGARPARHAQLSGNPMHAKPKDAQPRRA

Sequences:

>Translated_79_residues
MANQSLRQSEIDSLQYIATMSNELVQMAEASRFPMISYLLGMAYAEAFDVLRGARPARHAQLSGNPMHAKPKDAQPRRA
>Mature_78_residues
ANQSLRQSEIDSLQYIATMSNELVQMAEASRFPMISYLLGMAYAEAFDVLRGARPARHAQLSGNPMHAKPKDAQPRRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8807; Mature: 8676

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.6 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANQSLRQSEIDSLQYIATMSNELVQMAEASRFPMISYLLGMAYAEAFDVLRGARPARHA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
QLSGNPMHAKPKDAQPRRA
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ANQSLRQSEIDSLQYIATMSNELVQMAEASRFPMISYLLGMAYAEAFDVLRGARPARHA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
QLSGNPMHAKPKDAQPRRA
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA