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The map label for this gene is ugpB [C]

Identifier: 13473518

GI number: 13473518

Start: 3315395

End: 3316621

Strand: Reverse

Name: ugpB [C]

Synonym: mll4149

Alternate gene names: 13473518

Gene position: 3316621-3315395 (Counterclockwise)

Preceding gene: 13473522

Following gene: 13473517

Centisome position: 47.14

GC content: 61.37

Gene sequence:

>1227_bases
ATGAGCCTTGCCAAATGGACTGTCGGCCTGATGGCCGGAATGAGCATGCTGGCCTTCGCGGCGCAGGCGAATGCGGGTGA
AGTGCGCGTCACCGTCGCCGAATACAGCGCCAAGACCGGTCCGTATTTCGAAGCGGTGAAGAAGGAATTCGAGGCCAAGA
ACCCCGGCATCACCATAAAGTTCGAGGTCGTGCCGTGGGATGTGCTCTTGCAGAAGCTGACCACCGACATCACCGCCGGC
ACCAATGCTGACCTGTCGATCATCGGCACGCGCTGGCTGATCGACTTCGTCCAGCAGGACGTCGCCGAACCGCTTGACAG
CTACATCAAGCCTGACTTCAAGGGCCGCTTCATCGACACCTTCCTGTCGCCCTCGATCATGGACGGCAAGACCTACGGCC
TGCCGATCGCCGCTTCGGCGCGCGCGCTCTATTACAACAAGGAGCTGTTCGAGAAGGCCGGCATCGCCAAGCCGCCGGCG
ACCTGGACCGAGCTGCAGGACGATGCGCGCAAGATCAAGGCGTTGGGGTCCTTCGGCTTCGGCCTGCAGGGCAAGGAGAT
CGAGACCGACGTCTATTACTACTACGCCATGTGGTCGCAAGGCACCGAGATCCTCAACAAGGACGGCACGTCGGGCCTCG
GGACGCCGGGCGCGCTCGAAGCCGCAAAGCTGTACAAGTCGATGATCGATGAGGGGCTGACCGAGCCCGGCGTCACTTCC
AACAACCGCGAAGACGTGCAGAACCTGTTCAAGCAGGGCAAGGTCGGCATGATGATCACCGCACCCTTCCTGTCCAACCA
GATCAAGGACGAAGCGCCGAAGCTGAAATACGGCGTGGCGGCCATTCCGGCCGGTCCGACCGGCGCGCGGGGCACCTATG
GCGTCACGGATTCCATCATCATGTTCAAGAATTCCAAGAACAAGGATGAGGCCTGGAAGCTGCTCGACTTCCTGTTCACC
ACGGAACAGCGCGCCAAGTTCACGCAAGGCGAAGGCTTCCTGCCGGTGAACAAGGAAGAGGCCAAGATGGACTATTACGT
CAACAATGCCGATCTCGCCGCCTTCACCGCGCTGCTGCCCGACGCCCGCTTCGCGCCGGTCATTCCGGGTTGGGAAGAGA
TCGCCCAGATCACGTCCGACGCCATGCAGAAGATCTATCTCGGCGGCGACCCCGAGGCAGGCCTGAAGGACGCGGCGGCG
AAGGCCAATGCAGTGCTGAAGAAATAG

Upstream 100 bases:

>100_bases
GCATGCCGTGAATTCCTCGATAATGTAGGAAAGTCACATAAATCTTGCGCCAGCCATCGGCGCAAGGAGCGCAAATGCGC
GGAACAATGGGAGAGATCAG

Downstream 100 bases:

>100_bases
GGCGTATCTCCCTGCGCCCCGTGGCGCGCCCCAGACTCAGGCGGGGCGCGCCACATCTTGCAGATGCGAATTTTGGATTC
GCCAGCCAGGCCAGCCGATG

Product: sugar ABC transporter, (sugar-binding protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MSLAKWTVGLMAGMSMLAFAAQANAGEVRVTVAEYSAKTGPYFEAVKKEFEAKNPGITIKFEVVPWDVLLQKLTTDITAG
TNADLSIIGTRWLIDFVQQDVAEPLDSYIKPDFKGRFIDTFLSPSIMDGKTYGLPIAASARALYYNKELFEKAGIAKPPA
TWTELQDDARKIKALGSFGFGLQGKEIETDVYYYYAMWSQGTEILNKDGTSGLGTPGALEAAKLYKSMIDEGLTEPGVTS
NNREDVQNLFKQGKVGMMITAPFLSNQIKDEAPKLKYGVAAIPAGPTGARGTYGVTDSIIMFKNSKNKDEAWKLLDFLFT
TEQRAKFTQGEGFLPVNKEEAKMDYYVNNADLAAFTALLPDARFAPVIPGWEEIAQITSDAMQKIYLGGDPEAGLKDAAA
KANAVLKK

Sequences:

>Translated_408_residues
MSLAKWTVGLMAGMSMLAFAAQANAGEVRVTVAEYSAKTGPYFEAVKKEFEAKNPGITIKFEVVPWDVLLQKLTTDITAG
TNADLSIIGTRWLIDFVQQDVAEPLDSYIKPDFKGRFIDTFLSPSIMDGKTYGLPIAASARALYYNKELFEKAGIAKPPA
TWTELQDDARKIKALGSFGFGLQGKEIETDVYYYYAMWSQGTEILNKDGTSGLGTPGALEAAKLYKSMIDEGLTEPGVTS
NNREDVQNLFKQGKVGMMITAPFLSNQIKDEAPKLKYGVAAIPAGPTGARGTYGVTDSIIMFKNSKNKDEAWKLLDFLFT
TEQRAKFTQGEGFLPVNKEEAKMDYYVNNADLAAFTALLPDARFAPVIPGWEEIAQITSDAMQKIYLGGDPEAGLKDAAA
KANAVLKK
>Mature_407_residues
SLAKWTVGLMAGMSMLAFAAQANAGEVRVTVAEYSAKTGPYFEAVKKEFEAKNPGITIKFEVVPWDVLLQKLTTDITAGT
NADLSIIGTRWLIDFVQQDVAEPLDSYIKPDFKGRFIDTFLSPSIMDGKTYGLPIAASARALYYNKELFEKAGIAKPPAT
WTELQDDARKIKALGSFGFGLQGKEIETDVYYYYAMWSQGTEILNKDGTSGLGTPGALEAAKLYKSMIDEGLTEPGVTSN
NREDVQNLFKQGKVGMMITAPFLSNQIKDEAPKLKYGVAAIPAGPTGARGTYGVTDSIIMFKNSKNKDEAWKLLDFLFTT
EQRAKFTQGEGFLPVNKEEAKMDYYVNNADLAAFTALLPDARFAPVIPGWEEIAQITSDAMQKIYLGGDPEAGLKDAAAK
ANAVLKK

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 44560; Mature: 44429

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAKWTVGLMAGMSMLAFAAQANAGEVRVTVAEYSAKTGPYFEAVKKEFEAKNPGITIK
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEE
FEVVPWDVLLQKLTTDITAGTNADLSIIGTRWLIDFVQQDVAEPLDSYIKPDFKGRFIDT
EEECCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
FLSPSIMDGKTYGLPIAASARALYYNKELFEKAGIAKPPATWTELQDDARKIKALGSFGF
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
GLQGKEIETDVYYYYAMWSQGTEILNKDGTSGLGTPGALEAAKLYKSMIDEGLTEPGVTS
CCCCCEECCEEEEEEEEECCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
NNREDVQNLFKQGKVGMMITAPFLSNQIKDEAPKLKYGVAAIPAGPTGARGTYGVTDSII
CCHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCEEECEEECCCCCCCCCCCCCCCCCEE
MFKNSKNKDEAWKLLDFLFTTEQRAKFTQGEGFLPVNKEEAKMDYYVNNADLAAFTALLP
EEECCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCHHHCCEEEEECCCHHHHHHHHCC
DARFAPVIPGWEEIAQITSDAMQKIYLGGDPEAGLKDAAAKANAVLKK
CCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLAKWTVGLMAGMSMLAFAAQANAGEVRVTVAEYSAKTGPYFEAVKKEFEAKNPGITIK
CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEE
FEVVPWDVLLQKLTTDITAGTNADLSIIGTRWLIDFVQQDVAEPLDSYIKPDFKGRFIDT
EEECCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
FLSPSIMDGKTYGLPIAASARALYYNKELFEKAGIAKPPATWTELQDDARKIKALGSFGF
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
GLQGKEIETDVYYYYAMWSQGTEILNKDGTSGLGTPGALEAAKLYKSMIDEGLTEPGVTS
CCCCCEECCEEEEEEEEECCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
NNREDVQNLFKQGKVGMMITAPFLSNQIKDEAPKLKYGVAAIPAGPTGARGTYGVTDSII
CCHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCEEECEEECCCCCCCCCCCCCCCCCEE
MFKNSKNKDEAWKLLDFLFTTEQRAKFTQGEGFLPVNKEEAKMDYYVNNADLAAFTALLP
EEECCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCHHHCCEEEEECCCHHHHHHHHCC
DARFAPVIPGWEEIAQITSDAMQKIYLGGDPEAGLKDAAAKANAVLKK
CCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA