Click here to switch to the map view.

The map label for this gene is ugpA [C]

Identifier: 13473517

GI number: 13473517

Start: 3314428

End: 3315297

Strand: Reverse

Name: ugpA [C]

Synonym: mll4147

Alternate gene names: 13473517

Gene position: 3315297-3314428 (Counterclockwise)

Preceding gene: 13473518

Following gene: 13473516

Centisome position: 47.12

GC content: 63.45

Gene sequence:

>870_bases
ATGCAAAATCGTTTCCTGCCCTATCTCCTGACCTTGCCCAGCCTGTTCCTGGCGGCGGTCGTCATCTTCTGGCCGGTCTG
GGACCTCATCCAGATCTCGACGCATGACGTCAACCGCTTCGGCCAGTTGCGCGAGTTCAGCGGCCTTGCCAATTTCGCGT
CGCTTGCCGCCGATCCCGACTTCGTCGCGGCACTCTGGCGCACCGGTGTGTGGACCGTGCTGGTGGTCGGCGGTGCGCTG
CTTTTGTCGGTGCCGGTGGCGATGATCCTCAACACCGATTTCTACGGCCGCGGCCTTGCCCGCGTCATCATCATGCTGCC
CTGGGCGGTGTCGCTGACCATGACGGCCGTGGTCTGGCGCTGGGCGCTCAGCGGCGAAAGCGGCATGCTGAATTCGGCGC
TGCTCGGCCTTGGCCTGATCGACCACAACATCCAGTGGCTGGCCAGCGCCGAGACGGCGTTCCCGATGCAGGTGCTGATC
GGCATATTGGTGACGGTGCCGTTCACCACGACGATCTTCCTCGGCGGCCTGTCGTCGATCCCGGACGATCTCTACGAGGC
GGCGGCGCTCGAGGGCGCCACGCCGCTGCAGCAGTTCCGCGAGATCACCTTTCCGCTGCTGAAGCCGTTCATCAACATCG
CCATCGTGCTCAACACCATCTACGTCTTCAACTCCTTCCCGATCATCTGGGTGATGACGCAGGGCGGGCCGGCCAACTCG
ACCGACATCCTGGTCACCCACCTCTACAAGCTCGCCTTCCGCATCGGCAAACTGGGCGAGGCCTCGGCGGTGTCGCTGGT
GATGTTCGCCATATTGCTGGTCTTCACCATGATCTATGTGCGGTTGGCGATGCGGGAGCAGCGCGCATGA

Upstream 100 bases:

>100_bases
TAGGGCGTATCTCCCTGCGCCCCGTGGCGCGCCCCAGACTCAGGCGGGGCGCGCCACATCTTGCAGATGCGAATTTTGGA
TTCGCCAGCCAGGCCAGCCG

Downstream 100 bases:

>100_bases
CCAGCAAACTCAAACGCACCATCATCGCCTGGCTGCTTTTGGCGCCGCTGATCGTGGTGACGATCTTTCCCTTCGCGGTG
ATGTTCCTCACCGCGGTCAA

Product: sugar ABC transporter permease protein ThuF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MQNRFLPYLLTLPSLFLAAVVIFWPVWDLIQISTHDVNRFGQLREFSGLANFASLAADPDFVAALWRTGVWTVLVVGGAL
LLSVPVAMILNTDFYGRGLARVIIMLPWAVSLTMTAVVWRWALSGESGMLNSALLGLGLIDHNIQWLASAETAFPMQVLI
GILVTVPFTTTIFLGGLSSIPDDLYEAAALEGATPLQQFREITFPLLKPFINIAIVLNTIYVFNSFPIIWVMTQGGPANS
TDILVTHLYKLAFRIGKLGEASAVSLVMFAILLVFTMIYVRLAMREQRA

Sequences:

>Translated_289_residues
MQNRFLPYLLTLPSLFLAAVVIFWPVWDLIQISTHDVNRFGQLREFSGLANFASLAADPDFVAALWRTGVWTVLVVGGAL
LLSVPVAMILNTDFYGRGLARVIIMLPWAVSLTMTAVVWRWALSGESGMLNSALLGLGLIDHNIQWLASAETAFPMQVLI
GILVTVPFTTTIFLGGLSSIPDDLYEAAALEGATPLQQFREITFPLLKPFINIAIVLNTIYVFNSFPIIWVMTQGGPANS
TDILVTHLYKLAFRIGKLGEASAVSLVMFAILLVFTMIYVRLAMREQRA
>Mature_289_residues
MQNRFLPYLLTLPSLFLAAVVIFWPVWDLIQISTHDVNRFGQLREFSGLANFASLAADPDFVAALWRTGVWTVLVVGGAL
LLSVPVAMILNTDFYGRGLARVIIMLPWAVSLTMTAVVWRWALSGESGMLNSALLGLGLIDHNIQWLASAETAFPMQVLI
GILVTVPFTTTIFLGGLSSIPDDLYEAAALEGATPLQQFREITFPLLKPFINIAIVLNTIYVFNSFPIIWVMTQGGPANS
TDILVTHLYKLAFRIGKLGEASAVSLVMFAILLVFTMIYVRLAMREQRA

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=291, Percent_Identity=29.2096219931272, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1787570, Length=231, Percent_Identity=32.9004329004329, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1790465, Length=261, Percent_Identity=30.2681992337165, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI87082099, Length=236, Percent_Identity=27.5423728813559, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31864; Mature: 31864

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNRFLPYLLTLPSLFLAAVVIFWPVWDLIQISTHDVNRFGQLREFSGLANFASLAADPD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FVAALWRTGVWTVLVVGGALLLSVPVAMILNTDFYGRGLARVIIMLPWAVSLTMTAVVWR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WALSGESGMLNSALLGLGLIDHNIQWLASAETAFPMQVLIGILVTVPFTTTIFLGGLSSI
HHHCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCC
PDDLYEAAALEGATPLQQFREITFPLLKPFINIAIVLNTIYVFNSFPIIWVMTQGGPANS
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
TDILVTHLYKLAFRIGKLGEASAVSLVMFAILLVFTMIYVRLAMREQRA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQNRFLPYLLTLPSLFLAAVVIFWPVWDLIQISTHDVNRFGQLREFSGLANFASLAADPD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FVAALWRTGVWTVLVVGGALLLSVPVAMILNTDFYGRGLARVIIMLPWAVSLTMTAVVWR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WALSGESGMLNSALLGLGLIDHNIQWLASAETAFPMQVLIGILVTVPFTTTIFLGGLSSI
HHHCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCC
PDDLYEAAALEGATPLQQFREITFPLLKPFINIAIVLNTIYVFNSFPIIWVMTQGGPANS
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
TDILVTHLYKLAFRIGKLGEASAVSLVMFAILLVFTMIYVRLAMREQRA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA