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The map label for this gene is ybfB [H]

Identifier: 13473499

GI number: 13473499

Start: 3297046

End: 3298386

Strand: Reverse

Name: ybfB [H]

Synonym: mll4118

Alternate gene names: 13473499

Gene position: 3298386-3297046 (Counterclockwise)

Preceding gene: 13473502

Following gene: 13473498

Centisome position: 46.88

GC content: 66.44

Gene sequence:

>1341_bases
ATGTTACCGATCGGTACGTATACATACTCCCATCTTTGCAACGTACCGGTCAGTAACATGATAGCTCAATCCCGTCCGTT
TGGCCAGCGCTACGCTTTCGTGGTGGTCGGTGTCATCTTCCTTTGTCTTCTGATCGCAGCCGGGCTGCGCTCGGCGCCCG
CCGTCATGATGCTGCCGCTGGAAAACAGCTTTGGCTGGCGTCGCGACGTCATCTCGCTGGCCGCCGGCGTCGGCATCCTG
CTCTATGGTCTGACGGGCCCGTTCGCCGCCGCGCTGATGGAGCGGATCGGGCTGCGCCGCACGCTGATCGCTTCGCTGCT
GGTGATGTCGGGTTCGACCGCGCTCAGCCTGCTGATGACCAAGCCCTGGCATCTGTTCATCACCTGGGGCGTCTTCTCGG
GCATCGGCTCCGGCGCCGTTGCCAGCGTGCTGGGCGCCACCATCGTCAACCGCTGGTTCAAGACCAATCGCGGCCTGGTC
ATGGGATTGATGTCGGCCTCCAGCGCCACCGGCCTGCTGGTGTTCCTGCCGCTGCTCGCCTCGCTGGCGCAATCGGGCGG
CTGGAAGCCGGTCGCCGTCGCCGTCGCGGTCGCCACGGCCTGCCTGCTGCCGCTGGTCTGGCTGCTGGTGCCGGAACGCC
CGGCCTCGATCGGCATGGTGCGCTATGGCGCCGAGGCCGACGACGTGCCGCCGGTGCCCCCGGCATCGCAGGGCAATTTC
CTGGCGCATACGCTGAACACGCTGCGCCGCGCCGCCGGTACTCGCGTCTTCTGGTACCTGTTCGCCACCTTCTTCGTCTG
CGGTTTCACCACCAACGGGCTGGTTGGCACGCATTTGATCGCCTTCTGCGGCGACATGGGCATCGGCGAGGTGCAGGCCG
CCGGGCTGTTGTCGATGATGGGCATTTTCGACCTGATCGGCACGACGCTGTCGGGCTGGCTCACCGACCGTTTCGATCCG
CGCAAGCTGCTCGGCGTCTACTACGCCATCCGTGGCCTGTCGCTGATCTACCTGCCTTATTCCGGCTTCTCGGCGACCAG
CCTGATCATCTTCGCCGTGCTCTACGGCCTCGACTGGATCGCCACCGTGCCGCCGACGCTGCGGCTCGCCAACGAGGCGT
TCGGCGACCGCAGCGGCCCGATCGTGTTCGGCTGGATCGTCGCCGGCCATCAGGTTGGCGCCGCCACGGCCGCTGCCTTC
GGCGGCACCATGCGCGAGCTGCAGGGCAATTACGAACTGGCCTTCCTGATCGCCGGCATGACGGCCATCGCGGCGGCCTG
TATCTCGCTGCTGATCAACACCAGCCGGCCGGCCTTCGACCCGGAACCGCAGGCCGCTTGA

Upstream 100 bases:

>100_bases
CGAGGATCTTCTTGGCGGCCTTAGGCGGCGCCGATGCATGATCGTCGCTAATGGTCAGTTCAATATTTTTGTCGGTTGGC
ATCATGGGACTCGATTGACA

Downstream 100 bases:

>100_bases
GGCTGCTCTTTCCCTTCTCCCCCAGGGGGAGAAGGAAGAGATCGGCAGCTGTTCACTGTTATCAAAACTTCATGGTTCCG
AGATGCGGCTGAAACATTGA

Product: transmembrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MLPIGTYTYSHLCNVPVSNMIAQSRPFGQRYAFVVVGVIFLCLLIAAGLRSAPAVMMLPLENSFGWRRDVISLAAGVGIL
LYGLTGPFAAALMERIGLRRTLIASLLVMSGSTALSLLMTKPWHLFITWGVFSGIGSGAVASVLGATIVNRWFKTNRGLV
MGLMSASSATGLLVFLPLLASLAQSGGWKPVAVAVAVATACLLPLVWLLVPERPASIGMVRYGAEADDVPPVPPASQGNF
LAHTLNTLRRAAGTRVFWYLFATFFVCGFTTNGLVGTHLIAFCGDMGIGEVQAAGLLSMMGIFDLIGTTLSGWLTDRFDP
RKLLGVYYAIRGLSLIYLPYSGFSATSLIIFAVLYGLDWIATVPPTLRLANEAFGDRSGPIVFGWIVAGHQVGAATAAAF
GGTMRELQGNYELAFLIAGMTAIAAACISLLINTSRPAFDPEPQAA

Sequences:

>Translated_446_residues
MLPIGTYTYSHLCNVPVSNMIAQSRPFGQRYAFVVVGVIFLCLLIAAGLRSAPAVMMLPLENSFGWRRDVISLAAGVGIL
LYGLTGPFAAALMERIGLRRTLIASLLVMSGSTALSLLMTKPWHLFITWGVFSGIGSGAVASVLGATIVNRWFKTNRGLV
MGLMSASSATGLLVFLPLLASLAQSGGWKPVAVAVAVATACLLPLVWLLVPERPASIGMVRYGAEADDVPPVPPASQGNF
LAHTLNTLRRAAGTRVFWYLFATFFVCGFTTNGLVGTHLIAFCGDMGIGEVQAAGLLSMMGIFDLIGTTLSGWLTDRFDP
RKLLGVYYAIRGLSLIYLPYSGFSATSLIIFAVLYGLDWIATVPPTLRLANEAFGDRSGPIVFGWIVAGHQVGAATAAAF
GGTMRELQGNYELAFLIAGMTAIAAACISLLINTSRPAFDPEPQAA
>Mature_446_residues
MLPIGTYTYSHLCNVPVSNMIAQSRPFGQRYAFVVVGVIFLCLLIAAGLRSAPAVMMLPLENSFGWRRDVISLAAGVGIL
LYGLTGPFAAALMERIGLRRTLIASLLVMSGSTALSLLMTKPWHLFITWGVFSGIGSGAVASVLGATIVNRWFKTNRGLV
MGLMSASSATGLLVFLPLLASLAQSGGWKPVAVAVAVATACLLPLVWLLVPERPASIGMVRYGAEADDVPPVPPASQGNF
LAHTLNTLRRAAGTRVFWYLFATFFVCGFTTNGLVGTHLIAFCGDMGIGEVQAAGLLSMMGIFDLIGTTLSGWLTDRFDP
RKLLGVYYAIRGLSLIYLPYSGFSATSLIIFAVLYGLDWIATVPPTLRLANEAFGDRSGPIVFGWIVAGHQVGAATAAAF
GGTMRELQGNYELAFLIAGMTAIAAACISLLINTSRPAFDPEPQAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI42475555, Length=388, Percent_Identity=25.5154639175258, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47237; Mature: 47237

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPIGTYTYSHLCNVPVSNMIAQSRPFGQRYAFVVVGVIFLCLLIAAGLRSAPAVMMLPL
CCCCCCCHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
ENSFGWRRDVISLAAGVGILLYGLTGPFAAALMERIGLRRTLIASLLVMSGSTALSLLMT
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHC
KPWHLFITWGVFSGIGSGAVASVLGATIVNRWFKTNRGLVMGLMSASSATGLLVFLPLLA
CCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH
SLAQSGGWKPVAVAVAVATACLLPLVWLLVPERPASIGMVRYGAEADDVPPVPPASQGNF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCH
LAHTLNTLRRAAGTRVFWYLFATFFVCGFTTNGLVGTHLIAFCGDMGIGEVQAAGLLSMM
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
GIFDLIGTTLSGWLTDRFDPRKLLGVYYAIRGLSLIYLPYSGFSATSLIIFAVLYGLDWI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCHHH
ATVPPTLRLANEAFGDRSGPIVFGWIVAGHQVGAATAAAFGGTMRELQGNYELAFLIAGM
HHCCHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHCCCCEEEHHHHHH
TAIAAACISLLINTSRPAFDPEPQAA
HHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLPIGTYTYSHLCNVPVSNMIAQSRPFGQRYAFVVVGVIFLCLLIAAGLRSAPAVMMLPL
CCCCCCCHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
ENSFGWRRDVISLAAGVGILLYGLTGPFAAALMERIGLRRTLIASLLVMSGSTALSLLMT
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHC
KPWHLFITWGVFSGIGSGAVASVLGATIVNRWFKTNRGLVMGLMSASSATGLLVFLPLLA
CCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH
SLAQSGGWKPVAVAVAVATACLLPLVWLLVPERPASIGMVRYGAEADDVPPVPPASQGNF
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCH
LAHTLNTLRRAAGTRVFWYLFATFFVCGFTTNGLVGTHLIAFCGDMGIGEVQAAGLLSMM
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
GIFDLIGTTLSGWLTDRFDPRKLLGVYYAIRGLSLIYLPYSGFSATSLIIFAVLYGLDWI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCHHH
ATVPPTLRLANEAFGDRSGPIVFGWIVAGHQVGAATAAAFGGTMRELQGNYELAFLIAGM
HHCCHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHCCCCEEEHHHHHH
TAIAAACISLLINTSRPAFDPEPQAA
HHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]