Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13473016
Identifier: 13473016
GI number: 13473016
Start: 2816496
End: 2817134
Strand: Reverse
Name: 13473016
Synonym: mll3492
Alternate gene names: NA
Gene position: 2817134-2816496 (Counterclockwise)
Preceding gene: 13473017
Following gene: 13473015
Centisome position: 40.04
GC content: 66.51
Gene sequence:
>639_bases ATGAGGACCGAGGATCTCATCAAGGCGCTCGACGCCGATGCAAGCAGCAAGGCGATGCCGCTGCGCTCGGCCTGGTGGCT GGCGGCTGGCGGGGCCATTGTCATCGCGGCAATCGTTTTCCTGCTGACGATCGGCCCGCGCCCCGACTTCATGGTGGCCG CGCACACGATGCGCTTCCTGTCCAAATTCGTTTTCACCATCGTGCTTGCCGTCACCGCCTTCGGCCTGATCCGGGCGCTG TCGACACCTGGCGCCTCAACGGCCAGAGCCGTGGCCTGGATGGCCGCGGCCCCTCTGCTGGTGGTCGTGGCGGTGGTTCT GGAGCTCTTCATGGTGCCGGAGGCGTTGTGGGGCACCAGGATGATTGGCTCCAACATGATGATCTGCATGGGCTTCATCC CGCTGATCGGCATTGGCCCGCTGGCCCTCTTCCTGTGGATGCTGCGCTATGGCGCGCCGACGCGGCCGGTGCTTGCCGGC GCGGTGGCGGGGCTGCTCGCCGGCGGGCTGGCGGCAACCTTCTATGCCGCACACTGTTTCGACGATTCGCCGCTTTTCGT CGCCACCTGGTACACGATCGCGATCGCGGTTCTCGCCGTGCTCGGCGCGCTCGGCGGGCGGTTTTTCGTGCGCTGGTAA
Upstream 100 bases:
>100_bases AAGTTCGGTATCAGCGAGACGGCGGTGCGTGTGTCGCTGCATCGCGGGCTAGCCGCCATAGCCAAGCGATTCGGACAGGG GCGAGCTGGGCGGGAATGAC
Downstream 100 bases:
>100_bases TGCGGGGCCTGCGAATAGACCCCGTGCACACCGATCCTTAATCATGCCGGCAATTGTTTGCCGGTTGACCATATCGCAGC ACCCCCACGCAACCTTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MRTEDLIKALDADASSKAMPLRSAWWLAAGGAIVIAAIVFLLTIGPRPDFMVAAHTMRFLSKFVFTIVLAVTAFGLIRAL STPGASTARAVAWMAAAPLLVVVAVVLELFMVPEALWGTRMIGSNMMICMGFIPLIGIGPLALFLWMLRYGAPTRPVLAG AVAGLLAGGLAATFYAAHCFDDSPLFVATWYTIAIAVLAVLGALGGRFFVRW
Sequences:
>Translated_212_residues MRTEDLIKALDADASSKAMPLRSAWWLAAGGAIVIAAIVFLLTIGPRPDFMVAAHTMRFLSKFVFTIVLAVTAFGLIRAL STPGASTARAVAWMAAAPLLVVVAVVLELFMVPEALWGTRMIGSNMMICMGFIPLIGIGPLALFLWMLRYGAPTRPVLAG AVAGLLAGGLAATFYAAHCFDDSPLFVATWYTIAIAVLAVLGALGGRFFVRW >Mature_212_residues MRTEDLIKALDADASSKAMPLRSAWWLAAGGAIVIAAIVFLLTIGPRPDFMVAAHTMRFLSKFVFTIVLAVTAFGLIRAL STPGASTARAVAWMAAAPLLVVVAVVLELFMVPEALWGTRMIGSNMMICMGFIPLIGIGPLALFLWMLRYGAPTRPVLAG AVAGLLAGGLAATFYAAHCFDDSPLFVATWYTIAIAVLAVLGALGGRFFVRW
Specific function: Unknown
COG id: COG4944
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22503; Mature: 22503
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTEDLIKALDADASSKAMPLRSAWWLAAGGAIVIAAIVFLLTIGPRPDFMVAAHTMRFL CCHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH SKFVFTIVLAVTAFGLIRALSTPGASTARAVAWMAAAPLLVVVAVVLELFMVPEALWGTR HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIGSNMMICMGFIPLIGIGPLALFLWMLRYGAPTRPVLAGAVAGLLAGGLAATFYAAHCF HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC DDSPLFVATWYTIAIAVLAVLGALGGRFFVRW CCCCHHHHHHHHHHHHHHHHHHHHCCCEEECC >Mature Secondary Structure MRTEDLIKALDADASSKAMPLRSAWWLAAGGAIVIAAIVFLLTIGPRPDFMVAAHTMRFL CCHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH SKFVFTIVLAVTAFGLIRALSTPGASTARAVAWMAAAPLLVVVAVVLELFMVPEALWGTR HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIGSNMMICMGFIPLIGIGPLALFLWMLRYGAPTRPVLAGAVAGLLAGGLAATFYAAHCF HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC DDSPLFVATWYTIAIAVLAVLGALGGRFFVRW CCCCHHHHHHHHHHHHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA