Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13473016

Identifier: 13473016

GI number: 13473016

Start: 2816496

End: 2817134

Strand: Reverse

Name: 13473016

Synonym: mll3492

Alternate gene names: NA

Gene position: 2817134-2816496 (Counterclockwise)

Preceding gene: 13473017

Following gene: 13473015

Centisome position: 40.04

GC content: 66.51

Gene sequence:

>639_bases
ATGAGGACCGAGGATCTCATCAAGGCGCTCGACGCCGATGCAAGCAGCAAGGCGATGCCGCTGCGCTCGGCCTGGTGGCT
GGCGGCTGGCGGGGCCATTGTCATCGCGGCAATCGTTTTCCTGCTGACGATCGGCCCGCGCCCCGACTTCATGGTGGCCG
CGCACACGATGCGCTTCCTGTCCAAATTCGTTTTCACCATCGTGCTTGCCGTCACCGCCTTCGGCCTGATCCGGGCGCTG
TCGACACCTGGCGCCTCAACGGCCAGAGCCGTGGCCTGGATGGCCGCGGCCCCTCTGCTGGTGGTCGTGGCGGTGGTTCT
GGAGCTCTTCATGGTGCCGGAGGCGTTGTGGGGCACCAGGATGATTGGCTCCAACATGATGATCTGCATGGGCTTCATCC
CGCTGATCGGCATTGGCCCGCTGGCCCTCTTCCTGTGGATGCTGCGCTATGGCGCGCCGACGCGGCCGGTGCTTGCCGGC
GCGGTGGCGGGGCTGCTCGCCGGCGGGCTGGCGGCAACCTTCTATGCCGCACACTGTTTCGACGATTCGCCGCTTTTCGT
CGCCACCTGGTACACGATCGCGATCGCGGTTCTCGCCGTGCTCGGCGCGCTCGGCGGGCGGTTTTTCGTGCGCTGGTAA

Upstream 100 bases:

>100_bases
AAGTTCGGTATCAGCGAGACGGCGGTGCGTGTGTCGCTGCATCGCGGGCTAGCCGCCATAGCCAAGCGATTCGGACAGGG
GCGAGCTGGGCGGGAATGAC

Downstream 100 bases:

>100_bases
TGCGGGGCCTGCGAATAGACCCCGTGCACACCGATCCTTAATCATGCCGGCAATTGTTTGCCGGTTGACCATATCGCAGC
ACCCCCACGCAACCTTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MRTEDLIKALDADASSKAMPLRSAWWLAAGGAIVIAAIVFLLTIGPRPDFMVAAHTMRFLSKFVFTIVLAVTAFGLIRAL
STPGASTARAVAWMAAAPLLVVVAVVLELFMVPEALWGTRMIGSNMMICMGFIPLIGIGPLALFLWMLRYGAPTRPVLAG
AVAGLLAGGLAATFYAAHCFDDSPLFVATWYTIAIAVLAVLGALGGRFFVRW

Sequences:

>Translated_212_residues
MRTEDLIKALDADASSKAMPLRSAWWLAAGGAIVIAAIVFLLTIGPRPDFMVAAHTMRFLSKFVFTIVLAVTAFGLIRAL
STPGASTARAVAWMAAAPLLVVVAVVLELFMVPEALWGTRMIGSNMMICMGFIPLIGIGPLALFLWMLRYGAPTRPVLAG
AVAGLLAGGLAATFYAAHCFDDSPLFVATWYTIAIAVLAVLGALGGRFFVRW
>Mature_212_residues
MRTEDLIKALDADASSKAMPLRSAWWLAAGGAIVIAAIVFLLTIGPRPDFMVAAHTMRFLSKFVFTIVLAVTAFGLIRAL
STPGASTARAVAWMAAAPLLVVVAVVLELFMVPEALWGTRMIGSNMMICMGFIPLIGIGPLALFLWMLRYGAPTRPVLAG
AVAGLLAGGLAATFYAAHCFDDSPLFVATWYTIAIAVLAVLGALGGRFFVRW

Specific function: Unknown

COG id: COG4944

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22503; Mature: 22503

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTEDLIKALDADASSKAMPLRSAWWLAAGGAIVIAAIVFLLTIGPRPDFMVAAHTMRFL
CCHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SKFVFTIVLAVTAFGLIRALSTPGASTARAVAWMAAAPLLVVVAVVLELFMVPEALWGTR
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MIGSNMMICMGFIPLIGIGPLALFLWMLRYGAPTRPVLAGAVAGLLAGGLAATFYAAHCF
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
DDSPLFVATWYTIAIAVLAVLGALGGRFFVRW
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEECC
>Mature Secondary Structure
MRTEDLIKALDADASSKAMPLRSAWWLAAGGAIVIAAIVFLLTIGPRPDFMVAAHTMRFL
CCHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SKFVFTIVLAVTAFGLIRALSTPGASTARAVAWMAAAPLLVVVAVVLELFMVPEALWGTR
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MIGSNMMICMGFIPLIGIGPLALFLWMLRYGAPTRPVLAGAVAGLLAGGLAATFYAAHCF
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
DDSPLFVATWYTIAIAVLAVLGALGGRFFVRW
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA