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The map label for this gene is 13473003

Identifier: 13473003

GI number: 13473003

Start: 2804578

End: 2805135

Strand: Reverse

Name: 13473003

Synonym: mll3477

Alternate gene names: NA

Gene position: 2805135-2804578 (Counterclockwise)

Preceding gene: 13473004

Following gene: 13472995

Centisome position: 39.87

GC content: 61.65

Gene sequence:

>558_bases
GTGACGGTCGCCGTATCTCCGGATGGGCTTCCAGCACTGGTGCTGAATGCGGATTACCGTCCGCTCAGCTACTACCCCTT
GTCGCTCTGGTCCTGGCAGGACGCCATCAAGGCGGTGTTCCTCGACCGGGTGAACATCGTCGCCGAATATGAGCATGCGG
TGTCCTCGCCGACCTTCTCGATGAAGCTGCCGAGTGTGGTCAGCCTGAAGGCCTATGTGAAGCCGTCCAGGCACCCGGCC
TTCACCCGCTTCAACGTCTTCCTGCGCGACCGCTTCCAGTGCCAGTATTGCGGCACGCCCGACGACCTGACCTTCGACCA
CGTCATCCCCCGCCATCGCGGCGGTGCGACGACCTGGGAGAATGTCGTCGCCGCCTGTTCGCCCTGCAATTTGAGGAAAG
GCGGCATGATGCCGGCGCACGCCAAGATGTGGCCGCTGCAGAAGCCCTATCAGCCGACGGTGCATGATTTGCACAACAAC
GGCCGCCTGTTCCCGCCGAACCATCTGCATGAAAGCTGGATGGATTATCTGTACTGGGACGTCGAACTCGAACCCTAG

Upstream 100 bases:

>100_bases
TTTTTGACGGTTTGGGCAAGCGACAATCCGCTTCACATCCCTGTCATGTCGGGCTTACAGTATCCGCGCCGTTCGGGTCT
AGAACCAAGGAGGTAAACAC

Downstream 100 bases:

>100_bases
AGTTCGGCAGAAATCCGCCATGCTGGCCGCCTGACGCAGCTTTCTGCGCTTCCGGTGCTCACGTACTTAAGTACGCTCCG
CTCCGGTTCCCGAAAATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain-Containing Protein; HNH Endonuclease Domain Protein; Restriction Endonuclease; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Nuclease; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MTVAVSPDGLPALVLNADYRPLSYYPLSLWSWQDAIKAVFLDRVNIVAEYEHAVSSPTFSMKLPSVVSLKAYVKPSRHPA
FTRFNVFLRDRFQCQYCGTPDDLTFDHVIPRHRGGATTWENVVAACSPCNLRKGGMMPAHAKMWPLQKPYQPTVHDLHNN
GRLFPPNHLHESWMDYLYWDVELEP

Sequences:

>Translated_185_residues
MTVAVSPDGLPALVLNADYRPLSYYPLSLWSWQDAIKAVFLDRVNIVAEYEHAVSSPTFSMKLPSVVSLKAYVKPSRHPA
FTRFNVFLRDRFQCQYCGTPDDLTFDHVIPRHRGGATTWENVVAACSPCNLRKGGMMPAHAKMWPLQKPYQPTVHDLHNN
GRLFPPNHLHESWMDYLYWDVELEP
>Mature_184_residues
TVAVSPDGLPALVLNADYRPLSYYPLSLWSWQDAIKAVFLDRVNIVAEYEHAVSSPTFSMKLPSVVSLKAYVKPSRHPAF
TRFNVFLRDRFQCQYCGTPDDLTFDHVIPRHRGGATTWENVVAACSPCNLRKGGMMPAHAKMWPLQKPYQPTVHDLHNNG
RLFPPNHLHESWMDYLYWDVELEP

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21227; Mature: 21096

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAVSPDGLPALVLNADYRPLSYYPLSLWSWQDAIKAVFLDRVNIVAEYEHAVSSPTFS
CEEEECCCCCEEEEEECCCCCCEECCEEHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
MKLPSVVSLKAYVKPSRHPAFTRFNVFLRDRFQCQYCGTPDDLTFDHVIPRHRGGATTWE
EECCCEEEEEEEECCCCCCCEEEEEEEEECCEEEEECCCCCCCCHHHCCCCCCCCCCCHH
NVVAACSPCNLRKGGMMPAHAKMWPLQKPYQPTVHDLHNNGRLFPPNHLHESWMDYLYWD
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHEEEE
VELEP
EEECC
>Mature Secondary Structure 
TVAVSPDGLPALVLNADYRPLSYYPLSLWSWQDAIKAVFLDRVNIVAEYEHAVSSPTFS
EEEECCCCCEEEEEECCCCCCEECCEEHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
MKLPSVVSLKAYVKPSRHPAFTRFNVFLRDRFQCQYCGTPDDLTFDHVIPRHRGGATTWE
EECCCEEEEEEEECCCCCCCEEEEEEEEECCEEEEECCCCCCCCHHHCCCCCCCCCCCHH
NVVAACSPCNLRKGGMMPAHAKMWPLQKPYQPTVHDLHNNGRLFPPNHLHESWMDYLYWD
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHEEEE
VELEP
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA