Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is yedA [C]

Identifier: 13472363

GI number: 13472363

Start: 2132749

End: 2133654

Strand: Direct

Name: yedA [C]

Synonym: mlr2632

Alternate gene names: 13472363

Gene position: 2132749-2133654 (Clockwise)

Preceding gene: 13472362

Following gene: 13472364

Centisome position: 30.31

GC content: 66.67

Gene sequence:

>906_bases
ATGAAACCCAGGGACATCGCCGCCTACGCCTTCCTGACCGTCACCTGGGGCCTGTCGTTCCTCGTCCTGCTCAAGGTCGT
ACACGCATTCGGCTGGATCGGCGCGGTCACCTTGCGCTCGCTGATCGCCGGCATCACGCTCTTCCTGTTGGCGGCGGCGA
CGCGGCGCCGGCTCGATTTCAGCGCCGGCTGGCGGCACTTCGCCGCGGTCGGCGCGACGACAGTCGCGGCGCAGCTGATC
GGCCTGTCCTACGCCACGCCGCGCATCGGCACGGCGATGGCGGCCATCCTCGTCGCCGCGATCCCGCTGTTCTCGATGAT
CCTTGGCCAGTTATGGGGGCTTGAGCGCATCACCGTTCGCGGGCTGGCTGGCCTGCTGCTCGGCGCCGCGGGTATCGTGG
TCCTGGTCGGCTTCCCCTCGGTGCCGATCACGCCGTCCTTCGTATTCGGCTGCGCCGCCTCGCTGTTCAGCTCCTTCTCC
GCCGCCTTCGGCAGCAACTACACCAATCGCCATCTGCGTTCGGCCGGCTCGTTCGAACTCACCGGCGCCGCCTTCCTGTT
CGGCGGGCTGATGACGCTGCCGCTGTTGCTTGTCGTGCCGGTGCCGGCCATGCCGCGTCCTGTCGATTTCCTCTATCTCG
TCCTTCTCGCCTGCGTGATGAGCGCGCTGACCTATGTCGTCTATTTCCGGCTGGTGGCCAGCATTGGCGCAACCAGGACG
ATCAGTGTCGAATTCGCCGTGACCACGATCGCGGTGCTGGTTGGCACTGTCATGCTTGGCGAGTCGCTGGCCATCATCCA
GGGTTTCGGCGCGGTGGCGATCATCGGCGGCTGCATACTGGTGCTGGATCCGTTCCCGCGCCGGGCGAAAGCGGCGGCCT
TGCCATCCGCCCCGCCTTTGGTGTAA

Upstream 100 bases:

>100_bases
CAGCCTCTGGACTATGCGCTCGCGCTTGCCGCCAGACTGCGGAAACGGTACGCACGGCTGCAATCCTGCCTCTGCACGCA
AAGCTCTGCACCGACTCCCC

Downstream 100 bases:

>100_bases
TCGCTTCGCACACTCGAACGTCTTGAAAGGAGGGCTCACGTGTTCACGTTTCATCGTCACCATCGTCAGCGTGGCCCGAT
CTCTGCCCTGCAAGCCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MKPRDIAAYAFLTVTWGLSFLVLLKVVHAFGWIGAVTLRSLIAGITLFLLAAATRRRLDFSAGWRHFAAVGATTVAAQLI
GLSYATPRIGTAMAAILVAAIPLFSMILGQLWGLERITVRGLAGLLLGAAGIVVLVGFPSVPITPSFVFGCAASLFSSFS
AAFGSNYTNRHLRSAGSFELTGAAFLFGGLMTLPLLLVVPVPAMPRPVDFLYLVLLACVMSALTYVVYFRLVASIGATRT
ISVEFAVTTIAVLVGTVMLGESLAIIQGFGAVAIIGGCILVLDPFPRRAKAAALPSAPPLV

Sequences:

>Translated_301_residues
MKPRDIAAYAFLTVTWGLSFLVLLKVVHAFGWIGAVTLRSLIAGITLFLLAAATRRRLDFSAGWRHFAAVGATTVAAQLI
GLSYATPRIGTAMAAILVAAIPLFSMILGQLWGLERITVRGLAGLLLGAAGIVVLVGFPSVPITPSFVFGCAASLFSSFS
AAFGSNYTNRHLRSAGSFELTGAAFLFGGLMTLPLLLVVPVPAMPRPVDFLYLVLLACVMSALTYVVYFRLVASIGATRT
ISVEFAVTTIAVLVGTVMLGESLAIIQGFGAVAIIGGCILVLDPFPRRAKAAALPSAPPLV
>Mature_301_residues
MKPRDIAAYAFLTVTWGLSFLVLLKVVHAFGWIGAVTLRSLIAGITLFLLAAATRRRLDFSAGWRHFAAVGATTVAAQLI
GLSYATPRIGTAMAAILVAAIPLFSMILGQLWGLERITVRGLAGLLLGAAGIVVLVGFPSVPITPSFVFGCAASLFSSFS
AAFGSNYTNRHLRSAGSFELTGAAFLFGGLMTLPLLLVVPVPAMPRPVDFLYLVLLACVMSALTYVVYFRLVASIGATRT
ISVEFAVTTIAVLVGTVMLGESLAIIQGFGAVAIIGGCILVLDPFPRRAKAAALPSAPPLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31471; Mature: 31471

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRDIAAYAFLTVTWGLSFLVLLKVVHAFGWIGAVTLRSLIAGITLFLLAAATRRRLDF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SAGWRHFAAVGATTVAAQLIGLSYATPRIGTAMAAILVAAIPLFSMILGQLWGLERITVR
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
GLAGLLLGAAGIVVLVGFPSVPITPSFVFGCAASLFSSFSAAFGSNYTNRHLRSAGSFEL
HHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEE
TGAAFLFGGLMTLPLLLVVPVPAMPRPVDFLYLVLLACVMSALTYVVYFRLVASIGATRT
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
ISVEFAVTTIAVLVGTVMLGESLAIIQGFGAVAIIGGCILVLDPFPRRAKAAALPSAPPL
EEEHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHCHHEEECCCCCHHHHHCCCCCCCC
V
C
>Mature Secondary Structure
MKPRDIAAYAFLTVTWGLSFLVLLKVVHAFGWIGAVTLRSLIAGITLFLLAAATRRRLDF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SAGWRHFAAVGATTVAAQLIGLSYATPRIGTAMAAILVAAIPLFSMILGQLWGLERITVR
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
GLAGLLLGAAGIVVLVGFPSVPITPSFVFGCAASLFSSFSAAFGSNYTNRHLRSAGSFEL
HHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEE
TGAAFLFGGLMTLPLLLVVPVPAMPRPVDFLYLVLLACVMSALTYVVYFRLVASIGATRT
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
ISVEFAVTTIAVLVGTVMLGESLAIIQGFGAVAIIGGCILVLDPFPRRAKAAALPSAPPL
EEEHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHCHHEEECCCCCHHHHHCCCCCCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA