Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13472345
Identifier: 13472345
GI number: 13472345
Start: 2110703
End: 2110909
Strand: Direct
Name: 13472345
Synonym: msr2608
Alternate gene names: NA
Gene position: 2110703-2110909 (Clockwise)
Preceding gene: 13472343
Following gene: 13472347
Centisome position: 30.0
GC content: 63.29
Gene sequence:
>207_bases GTGCCAACGCCGACGGCGGACCGATGCTGCCATGAAGGACGGCAAAAACCTTCGATGGCACGCAGGGCAAAGCCCGCAAG GGCCAAGACCAGCGTGGTCTGGAACGGACACTGCCTTGGGGTGGTGGCTGGCAGGACCGTCAAAATCAAGGCCGGCATGG CGCGACGACTTTGCGGAAGTTGCTGCCGCGACCGTGTCCTGATCTGA
Upstream 100 bases:
>100_bases AAGTGAAAGGCGGATTTCCTGAGGCCCGTACGGCCCGAAGCGAGAACAGGCTTGCCTGTTTCGAGGGACGGTAGCCGAGA CCTACGGGGCCGCGGAAAGC
Downstream 100 bases:
>100_bases CAGGGAGGCGCTGGGAGAAATCCCAGCGCCGACTGTCGTTTTCCTATCCCGCGCAATTTTTACGGTGTTTCCGGTTGGGG CTGCAACCGGCGGCGAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MPTPTADRCCHEGRQKPSMARRAKPARAKTSVVWNGHCLGVVAGRTVKIKAGMARRLCGSCCRDRVLI
Sequences:
>Translated_68_residues MPTPTADRCCHEGRQKPSMARRAKPARAKTSVVWNGHCLGVVAGRTVKIKAGMARRLCGSCCRDRVLI >Mature_67_residues PTPTADRCCHEGRQKPSMARRAKPARAKTSVVWNGHCLGVVAGRTVKIKAGMARRLCGSCCRDRVLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7421; Mature: 7290
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 13.2 %Cys+Met (Translated Protein) 9.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 11.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPTADRCCHEGRQKPSMARRAKPARAKTSVVWNGHCLGVVAGRTVKIKAGMARRLCGS CCCCCHHHHHHHCCCCCCHHHHCCCCCCCEEEEECCEEEEEECCCEEEECCCHHHHHHHH CCRDRVLI HHHCCCCC >Mature Secondary Structure PTPTADRCCHEGRQKPSMARRAKPARAKTSVVWNGHCLGVVAGRTVKIKAGMARRLCGS CCCCHHHHHHHCCCCCCHHHHCCCCCCCEEEEECCEEEEEECCCEEEECCCHHHHHHHH CCRDRVLI HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA