Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13472247
Identifier: 13472247
GI number: 13472247
Start: 2013228
End: 2014259
Strand: Direct
Name: 13472247
Synonym: mlr2477
Alternate gene names: NA
Gene position: 2013228-2014259 (Clockwise)
Preceding gene: 13472246
Following gene: 13472249
Centisome position: 28.61
GC content: 64.83
Gene sequence:
>1032_bases ATGGCGAGCACTGTCAGCGATTTCGGCTTGAGCTGCGGCATCTTGCCGGCGGGCGCGCACAATGCGATCACCGATGTGCC CGGTGTACGCGTCGGCCATTGCACGCTGCGCAATGGCGACATCAACACCGGCGTGACCGCGATCCTGCCGCATGGCGGAA ATCTGTTTCGCAAGAAGGTGACGGCGGCAAGCCATGTCATCAACGGCTTCGGCAAGACCATCGGCCTGACGCAGGTGCAG GAACTCGGCAGCATCGAAACGCCTGTTCTCTTGACCAACACGCTCTCGGTCGGCACCTGCGCCACGACGCTGATCCGCGA CGCCATCCGCCAGAACCCGGATATCGGCCGCACCACCGGAACCGTCAATCCGCTGGTCGGCGAATGCAATGATGGCCCGC TGAACGACATCCAGGCCCTGGCGATATCAGAGGAGCACGCCCTCGCCGCGCTGGCGGACGCGCATGAGGGTGAGGTCGAA CAAGGCAATGTCGGCGCCGGAACGGGAATGACTTGCTTCGGCTTCAAAGGCGGTATCGGTTCGGCGTCCAGAAGAATAGC GCTCGGTGGCGGCCATCACCTCGGCGTTCTCGTTCTGTCGAATTTCGGCAGACCCGGAGACCTCGTTCTGCCCGATGGGC GCCGGCCGACCTCCGGACAACCGGCCGGGGACGAGCGCGGCTCGGTCATGATCGTGCTGGCAACCGATTTGCCGCTCGAA CACCGCCAGCTTGAAAGGGTAGCGCGCCGCGCCGGAGCCGGCATCGCCAGACTCGGTTCCTTCTGGGGCCATGGCAGTGG TGACATCGCCATCGCCTTCAGCACCGGCAATCTGGTCGACCACGATGAAAGCCGCGACCTGGTGCCCCTGCTCGCGCTCA ACGAGGCGCGCATCGACATCCTGTTTCGCGCGGCGGCGGAAGCGACGCAGGAGGCGGTGTTGAACTCCATGCTGTCCGCC GAGGCCTTCACCGGCAGGGCCGGCAAGCATCGCGCATCGCTGGCCGACTGGCTACGCGATCAGCAACGTTAA
Upstream 100 bases:
>100_bases CGACCACGCGCTGTGTGCGGACGAGCACGTCCGATAGCGAAATCCGGTCCGGCGCGGATCTCGGCTTGGGCGCGTGCCGC TCGTAAGACCAGGAGCAGAC
Downstream 100 bases:
>100_bases GGCATGTCACCGAAAAGTGACCTCGGTTTGGGGGGCGACATGCATAAAAACAAAGACCTGAAGCGCGTCGCATGAAGCCA TTTCGATGCGACACGCTTTA
Product: D-aminopeptidase
Products: NA
Alternate protein names: D-Aminopeptidase; Aminopeptidase DmpA; L-Aminopeptidase/D-Esterase; Aminopeptidase; Peptidase S; T4 Family Peptidase; Peptidase T4 Family; Family; S58 Family Peptidase; L-Aminopeptidase DmpA; D-Amino Peptidase Dmpa Family; Serine Peptidase; L-Aminopeptidase Dmpa; Aminopeptidase DpmA; D-Alanine-D-Alanine Ligase / Aminopeptidase; Peptidase Family; Aminopeptidase-Like Protein; D-Aminopeptidease; D-AMINO PEPTIDASE DmpA Family; L-Aminopeptidase D-Ala-Esterase/Amidase
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MASTVSDFGLSCGILPAGAHNAITDVPGVRVGHCTLRNGDINTGVTAILPHGGNLFRKKVTAASHVINGFGKTIGLTQVQ ELGSIETPVLLTNTLSVGTCATTLIRDAIRQNPDIGRTTGTVNPLVGECNDGPLNDIQALAISEEHALAALADAHEGEVE QGNVGAGTGMTCFGFKGGIGSASRRIALGGGHHLGVLVLSNFGRPGDLVLPDGRRPTSGQPAGDERGSVMIVLATDLPLE HRQLERVARRAGAGIARLGSFWGHGSGDIAIAFSTGNLVDHDESRDLVPLLALNEARIDILFRAAAEATQEAVLNSMLSA EAFTGRAGKHRASLADWLRDQQR
Sequences:
>Translated_343_residues MASTVSDFGLSCGILPAGAHNAITDVPGVRVGHCTLRNGDINTGVTAILPHGGNLFRKKVTAASHVINGFGKTIGLTQVQ ELGSIETPVLLTNTLSVGTCATTLIRDAIRQNPDIGRTTGTVNPLVGECNDGPLNDIQALAISEEHALAALADAHEGEVE QGNVGAGTGMTCFGFKGGIGSASRRIALGGGHHLGVLVLSNFGRPGDLVLPDGRRPTSGQPAGDERGSVMIVLATDLPLE HRQLERVARRAGAGIARLGSFWGHGSGDIAIAFSTGNLVDHDESRDLVPLLALNEARIDILFRAAAEATQEAVLNSMLSA EAFTGRAGKHRASLADWLRDQQR >Mature_342_residues ASTVSDFGLSCGILPAGAHNAITDVPGVRVGHCTLRNGDINTGVTAILPHGGNLFRKKVTAASHVINGFGKTIGLTQVQE LGSIETPVLLTNTLSVGTCATTLIRDAIRQNPDIGRTTGTVNPLVGECNDGPLNDIQALAISEEHALAALADAHEGEVEQ GNVGAGTGMTCFGFKGGIGSASRRIALGGGHHLGVLVLSNFGRPGDLVLPDGRRPTSGQPAGDERGSVMIVLATDLPLEH RQLERVARRAGAGIARLGSFWGHGSGDIAIAFSTGNLVDHDESRDLVPLLALNEARIDILFRAAAEATQEAVLNSMLSAE AFTGRAGKHRASLADWLRDQQR
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35654; Mature: 35523
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTVSDFGLSCGILPAGAHNAITDVPGVRVGHCTLRNGDINTGVTAILPHGGNLFRKKV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHH TAASHVINGFGKTIGLTQVQELGSIETPVLLTNTLSVGTCATTLIRDAIRQNPDIGRTTG HHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC TVNPLVGECNDGPLNDIQALAISEEHALAALADAHEGEVEQGNVGAGTGMTCFGFKGGIG CCCCCCCCCCCCCCCHHEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCC SASRRIALGGGHHLGVLVLSNFGRPGDLVLPDGRRPTSGQPAGDERGSVMIVLATDLPLE CCCCEEEECCCCEEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCH HRQLERVARRAGAGIARLGSFWGHGSGDIAIAFSTGNLVDHDESRDLVPLLALNEARIDI HHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEH LFRAAAEATQEAVLNSMLSAEAFTGRAGKHRASLADWLRDQQR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure ASTVSDFGLSCGILPAGAHNAITDVPGVRVGHCTLRNGDINTGVTAILPHGGNLFRKKV CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHH TAASHVINGFGKTIGLTQVQELGSIETPVLLTNTLSVGTCATTLIRDAIRQNPDIGRTTG HHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC TVNPLVGECNDGPLNDIQALAISEEHALAALADAHEGEVEQGNVGAGTGMTCFGFKGGIG CCCCCCCCCCCCCCCHHEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCC SASRRIALGGGHHLGVLVLSNFGRPGDLVLPDGRRPTSGQPAGDERGSVMIVLATDLPLE CCCCEEEECCCCEEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCH HRQLERVARRAGAGIARLGSFWGHGSGDIAIAFSTGNLVDHDESRDLVPLLALNEARIDI HHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCEEH LFRAAAEATQEAVLNSMLSAEAFTGRAGKHRASLADWLRDQQR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA