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The map label for this gene is yjfJ [C]

Identifier: 13472231

GI number: 13472231

Start: 1995811

End: 1996488

Strand: Direct

Name: yjfJ [C]

Synonym: mlr2456

Alternate gene names: 13472231

Gene position: 1995811-1996488 (Clockwise)

Preceding gene: 13472228

Following gene: 13472232

Centisome position: 28.37

GC content: 66.67

Gene sequence:

>678_bases
ATGCTTAGCCTAATCAGAACATTGCTCGACGGCGCCGGCGCGCGGGCCGAGGACGGCTTGAAGGATCGCTTCGCCATCGA
CCTTCTGGCGCAGCGCATCCGCGACGCCGAGGCGGGTCTTGCCGCCGCCAAGCAGACACTTGCCTCACTCATCGTTCGCC
AGCGCGCCGAGCAGGCCGGTCTCGACCAGCTCCAACGCCGCCACGCGGATCTGGAAAGCCGCACGCTCAGCGCGCTCGCC
GCCGGCAACAACGGCCTGGCCGAAAGTGGCGCTGCTGCCATCGCCGAACTGGAGAATGAGCGCGAAGTCCGCCGCGCCAC
GGTGCAAAGCCTTGGCGAAAAGACGTTGCGGATGCGCGTTTCGGTGGAACGGGCGCATCGCCGCATCATCGACTTGAACC
AGGGCATGATCTCGGCCCGCGCCATCGATGCCGAGCGCAAGGCGCAGTCACGCCTTGTCAGGTCGATCGGCCATTCGGCG
AGCCTCAACGATGCCGAGGAGCTTTTGGCCCACATCACGGGAGCCAGCGACCCGTTCGAGGAGGCCGGCATCCTCGACGA
GATCGACGGCGAACTGCGTCACGAAGCGATCCGCGACCGCCTCGCCAATGCCGGACACGGCCCGGCGGTGAAGGTGCGCG
CCAAGGACGTGCTCGAGCGTCTGAAAGCCGTCAACTGA

Upstream 100 bases:

>100_bases
CCGGGATTTCGTGAACAGCGTTCAAAAGTCGCTTGAACAATGTTCATTTTCTGTTATGTTGACTTCGTGAACATCGTTCA
CGCGACAAGGGAGAAGAACC

Downstream 100 bases:

>100_bases
AACCAGTCTTTGCAGACCTGATTTCCATCAACCCAACCATCGCCAGATCAACGGAAAACTCCAATGAACGCCAATCAGAC
CTACATCATGTTCAACACCG

Product: hypothetical protein

Products: NA

Alternate protein names: PspA Family Regulator; Negative Regulator Protein

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MLSLIRTLLDGAGARAEDGLKDRFAIDLLAQRIRDAEAGLAAAKQTLASLIVRQRAEQAGLDQLQRRHADLESRTLSALA
AGNNGLAESGAAAIAELENEREVRRATVQSLGEKTLRMRVSVERAHRRIIDLNQGMISARAIDAERKAQSRLVRSIGHSA
SLNDAEELLAHITGASDPFEEAGILDEIDGELRHEAIRDRLANAGHGPAVKVRAKDVLERLKAVN

Sequences:

>Translated_225_residues
MLSLIRTLLDGAGARAEDGLKDRFAIDLLAQRIRDAEAGLAAAKQTLASLIVRQRAEQAGLDQLQRRHADLESRTLSALA
AGNNGLAESGAAAIAELENEREVRRATVQSLGEKTLRMRVSVERAHRRIIDLNQGMISARAIDAERKAQSRLVRSIGHSA
SLNDAEELLAHITGASDPFEEAGILDEIDGELRHEAIRDRLANAGHGPAVKVRAKDVLERLKAVN
>Mature_225_residues
MLSLIRTLLDGAGARAEDGLKDRFAIDLLAQRIRDAEAGLAAAKQTLASLIVRQRAEQAGLDQLQRRHADLESRTLSALA
AGNNGLAESGAAAIAELENEREVRRATVQSLGEKTLRMRVSVERAHRRIIDLNQGMISARAIDAERKAQSRLVRSIGHSA
SLNDAEELLAHITGASDPFEEAGILDEIDGELRHEAIRDRLANAGHGPAVKVRAKDVLERLKAVN

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24379; Mature: 24379

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLIRTLLDGAGARAEDGLKDRFAIDLLAQRIRDAEAGLAAAKQTLASLIVRQRAEQAG
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDQLQRRHADLESRTLSALAAGNNGLAESGAAAIAELENEREVRRATVQSLGEKTLRMRV
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVERAHRRIIDLNQGMISARAIDAERKAQSRLVRSIGHSASLNDAEELLAHITGASDPFE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHH
EAGILDEIDGELRHEAIRDRLANAGHGPAVKVRAKDVLERLKAVN
HCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCC
>Mature Secondary Structure
MLSLIRTLLDGAGARAEDGLKDRFAIDLLAQRIRDAEAGLAAAKQTLASLIVRQRAEQAG
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDQLQRRHADLESRTLSALAAGNNGLAESGAAAIAELENEREVRRATVQSLGEKTLRMRV
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVERAHRRIIDLNQGMISARAIDAERKAQSRLVRSIGHSASLNDAEELLAHITGASDPFE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHH
EAGILDEIDGELRHEAIRDRLANAGHGPAVKVRAKDVLERLKAVN
HCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA