Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13472222

Identifier: 13472222

GI number: 13472222

Start: 1986757

End: 1987029

Strand: Direct

Name: 13472222

Synonym: msr2443

Alternate gene names: NA

Gene position: 1986757-1987029 (Clockwise)

Preceding gene: 13472221

Following gene: 13472223

Centisome position: 28.24

GC content: 59.71

Gene sequence:

>273_bases
GTGCTAAGCCGCCGCCCAATCAACCAGAGGACGACAGCTGTGAGCGAACTGACCGTGGCCGAGGCGACCGAAAATATCTA
TGCATCGCTTCGGGCGGACAATGCCGACATCGATGCACATATCGCGACGCTCAAGGCAGCGCTGACACGCGCGGGGATGA
AAGAGGCGGTGTTCGATCCTGCCAAGTTGGCGCAGAGCAACCGCTCGGGCCGCAAATTGATGCAGGCTTATTTTCGCCAG
CGCGGCGTGAGCGTGAAGTTTTCGGACCAGTAG

Upstream 100 bases:

>100_bases
ATCGGCCAGGAGCAGCCCGGCCTAGGGCGCTGCGCCGATCGGATCCCTATGGCTGACCAGTCTGGCCGCTACGCATCGGT
ATCGGCGGCGCCGCGAATCT

Downstream 100 bases:

>100_bases
GAATCGGGACGCCTCGAACGGAGCATTCGCCTCTCGCCTACCCCTGCGTAAGCTTGTTATTGTGCAGTGCAGCAACGATG
TTGCTGGAAGTGCATTGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MLSRRPINQRTTAVSELTVAEATENIYASLRADNADIDAHIATLKAALTRAGMKEAVFDPAKLAQSNRSGRKLMQAYFRQ
RGVSVKFSDQ

Sequences:

>Translated_90_residues
MLSRRPINQRTTAVSELTVAEATENIYASLRADNADIDAHIATLKAALTRAGMKEAVFDPAKLAQSNRSGRKLMQAYFRQ
RGVSVKFSDQ
>Mature_90_residues
MLSRRPINQRTTAVSELTVAEATENIYASLRADNADIDAHIATLKAALTRAGMKEAVFDPAKLAQSNRSGRKLMQAYFRQ
RGVSVKFSDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9940; Mature: 9940

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRRPINQRTTAVSELTVAEATENIYASLRADNADIDAHIATLKAALTRAGMKEAVFDP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHCCH
AKLAQSNRSGRKLMQAYFRQRGVSVKFSDQ
HHHHHCCCCHHHHHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MLSRRPINQRTTAVSELTVAEATENIYASLRADNADIDAHIATLKAALTRAGMKEAVFDP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHCCH
AKLAQSNRSGRKLMQAYFRQRGVSVKFSDQ
HHHHHCCCCHHHHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA