| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472007
Identifier: 13472007
GI number: 13472007
Start: 1756505
End: 1757749
Strand: Reverse
Name: 13472007
Synonym: mll2163
Alternate gene names: NA
Gene position: 1757749-1756505 (Counterclockwise)
Preceding gene: 13472008
Following gene: 13472006
Centisome position: 24.98
GC content: 68.59
Gene sequence:
>1245_bases GTGAGCGACGCCAGGATCCCCGCCTCCGCCATCTGGGCGCTGGGCACCACGCAGATCGTCGGCTACGGCACGCTCTACTA CAGCTACAGCATCCTGGCGCCGGCGGTGGCGGCGGAACTCGCCTGGTCGCAGCAATGGGTGTTCGCCGTGCTGTCGGTGT CGCTGCTGGCAAGCGCTATACTGGCGCCGTTCGCCGGCAGCCTGGCGGACCGGGTCGGGGCCGGGCGTCTGATGGTGCCG GGATCGCTGGCGGCGGCAGGCGCGTTGCTGTTGTGCGCGCTGGCGCCGGGGCGCGCCGGCTTTGCGCTCGGCGTGCTGGC CATGGAACTCGCCTCCTGCTTCGTGCTCTACAGCACCGCCTTCGTCGCCATCGTGCAACTTGGTGGCGCGCGGCGCGGCA TTACCCATCTCACCTTGATCGCCGGCTTCGCCTCGACGCTGTTCTGGCCACTGACGACGCTGCTGCATCAGCATCTTGGC TGGCGGGAGGTGCTCATTCTCTTTGCCGCGCTCAACGCCTTTGTCTGCCTGCCGATCCATTGGTGGCTGGCTCGTCTTTC GGGCAGCATCGGCAAGGCGCGGGAGCGGATCGTCCCGGTTACGGCGGGCCTGTCCGGGCCGGTGCCCGGCGGGCGATGGT CGCTGCTGTTCGTCCTGGTGCTGGCCGGCTTTGCCATAGAGGGCTTCATGCTTTCGGCTGTTCTCGTGCAGATGGTGCCG CTGCTCACTCTGGTCGGCCTCGGTGGCGCCTCGGTGCTGGTCGCCAGCCTGTTTGGCCCATCGCAAGTGGCGAGCCGGCT GGTGAACATGCTGTTCGGCCGCGGCCTGTCGCAGACATCGCTGGCGCTCGGCGCGACGGCCGGACTGGCCGGCGGCCTTG CGGTGCTGCTCATGGTGGCGCCCTCCGTTCCCGGCGCCATGCTGTTCGCCGTGCTTTTCGGCTTCGGCTCGGGCCTGATG AGCATTGTCGGCGGCACGCTGCCGCTCGAATTGTTCGGCCATGAACGCTACGGCTCCTATGTCGGCTGGATCACCGCGGC GCGCCAGTTCAGTTCCGCCTTCGCCCCGTTCGGCCTGACGCTGATGATATCGGGCTTCGGCGTTTTCCCGGCCCTGTGGC TCAACGTCATGGTCGGCCTGTTCGGCATCGCGGCCTTCGCCGCCGTCGCGTTGATCAGCCGGCAATCGCGCAAGGGTGAG GAGAGCGGCATGGCCGATGCGGCTGCGCCCGGCGCGGCTGGATGA
Upstream 100 bases:
>100_bases CGGCGCCGGCGGCGATCGATGCCTGCTGCGTGGCGGATGCCGACGCCAAGGCCGTCGGCAAAAGCGGTTGCGGCTGTGCC GGCAAGATGGAAGCCGCCGA
Downstream 100 bases:
>100_bases CGGTTTCCGGTGCCCCGGCTATCAGAACTTATGGGGGGCGCCGCCTTTGGTGCGCCGGGCAGATTTCGCTGACCGCCATC ACTTCGATCCGCCGTCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Transporter Permease Protein; Facilitator Superfamily Transporter Transmembrane Protein; Transport Protein Transmembrane; Facilitator Superfamily MFS_1 Domain-Containing Protein; Transmembrane Protein; MSF Transporter Transmembrane Protein; MFS Family Permease; TRANSPORTER Facilitator Superfamily; MFS Family Transporter; Facilitator Family Transporter; Facilitator Superfamily Permease; Msf Transporter Protein
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MSDARIPASAIWALGTTQIVGYGTLYYSYSILAPAVAAELAWSQQWVFAVLSVSLLASAILAPFAGSLADRVGAGRLMVP GSLAAAGALLLCALAPGRAGFALGVLAMELASCFVLYSTAFVAIVQLGGARRGITHLTLIAGFASTLFWPLTTLLHQHLG WREVLILFAALNAFVCLPIHWWLARLSGSIGKARERIVPVTAGLSGPVPGGRWSLLFVLVLAGFAIEGFMLSAVLVQMVP LLTLVGLGGASVLVASLFGPSQVASRLVNMLFGRGLSQTSLALGATAGLAGGLAVLLMVAPSVPGAMLFAVLFGFGSGLM SIVGGTLPLELFGHERYGSYVGWITAARQFSSAFAPFGLTLMISGFGVFPALWLNVMVGLFGIAAFAAVALISRQSRKGE ESGMADAAAPGAAG
Sequences:
>Translated_414_residues MSDARIPASAIWALGTTQIVGYGTLYYSYSILAPAVAAELAWSQQWVFAVLSVSLLASAILAPFAGSLADRVGAGRLMVP GSLAAAGALLLCALAPGRAGFALGVLAMELASCFVLYSTAFVAIVQLGGARRGITHLTLIAGFASTLFWPLTTLLHQHLG WREVLILFAALNAFVCLPIHWWLARLSGSIGKARERIVPVTAGLSGPVPGGRWSLLFVLVLAGFAIEGFMLSAVLVQMVP LLTLVGLGGASVLVASLFGPSQVASRLVNMLFGRGLSQTSLALGATAGLAGGLAVLLMVAPSVPGAMLFAVLFGFGSGLM SIVGGTLPLELFGHERYGSYVGWITAARQFSSAFAPFGLTLMISGFGVFPALWLNVMVGLFGIAAFAAVALISRQSRKGE ESGMADAAAPGAAG >Mature_413_residues SDARIPASAIWALGTTQIVGYGTLYYSYSILAPAVAAELAWSQQWVFAVLSVSLLASAILAPFAGSLADRVGAGRLMVPG SLAAAGALLLCALAPGRAGFALGVLAMELASCFVLYSTAFVAIVQLGGARRGITHLTLIAGFASTLFWPLTTLLHQHLGW REVLILFAALNAFVCLPIHWWLARLSGSIGKARERIVPVTAGLSGPVPGGRWSLLFVLVLAGFAIEGFMLSAVLVQMVPL LTLVGLGGASVLVASLFGPSQVASRLVNMLFGRGLSQTSLALGATAGLAGGLAVLLMVAPSVPGAMLFAVLFGFGSGLMS IVGGTLPLELFGHERYGSYVGWITAARQFSSAFAPFGLTLMISGFGVFPALWLNVMVGLFGIAAFAAVALISRQSRKGEE SGMADAAAPGAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42557; Mature: 42426
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDARIPASAIWALGTTQIVGYGTLYYSYSILAPAVAAELAWSQQWVFAVLSVSLLASAI CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPFAGSLADRVGAGRLMVPGSLAAAGALLLCALAPGRAGFALGVLAMELASCFVLYSTA HHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH FVAIVQLGGARRGITHLTLIAGFASTLFWPLTTLLHQHLGWREVLILFAALNAFVCLPIH HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH WWLARLSGSIGKARERIVPVTAGLSGPVPGGRWSLLFVLVLAGFAIEGFMLSAVLVQMVP HHHHHHHCCHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTLVGLGGASVLVASLFGPSQVASRLVNMLFGRGLSQTSLALGATAGLAGGLAVLLMVA HHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC PSVPGAMLFAVLFGFGSGLMSIVGGTLPLELFGHERYGSYVGWITAARQFSSAFAPFGLT CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHH LMISGFGVFPALWLNVMVGLFGIAAFAAVALISRQSRKGEESGMADAAAPGAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDARIPASAIWALGTTQIVGYGTLYYSYSILAPAVAAELAWSQQWVFAVLSVSLLASAI CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAPFAGSLADRVGAGRLMVPGSLAAAGALLLCALAPGRAGFALGVLAMELASCFVLYSTA HHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH FVAIVQLGGARRGITHLTLIAGFASTLFWPLTTLLHQHLGWREVLILFAALNAFVCLPIH HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH WWLARLSGSIGKARERIVPVTAGLSGPVPGGRWSLLFVLVLAGFAIEGFMLSAVLVQMVP HHHHHHHCCHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTLVGLGGASVLVASLFGPSQVASRLVNMLFGRGLSQTSLALGATAGLAGGLAVLLMVA HHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC PSVPGAMLFAVLFGFGSGLMSIVGGTLPLELFGHERYGSYVGWITAARQFSSAFAPFGLT CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHH LMISGFGVFPALWLNVMVGLFGIAAFAAVALISRQSRKGEESGMADAAAPGAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA