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The map label for this gene is 13471943

Identifier: 13471943

GI number: 13471943

Start: 1697115

End: 1697402

Strand: Reverse

Name: 13471943

Synonym: msl2076

Alternate gene names: NA

Gene position: 1697402-1697115 (Counterclockwise)

Preceding gene: 13471944

Following gene: 13471942

Centisome position: 24.12

GC content: 57.29

Gene sequence:

>288_bases
ATGACCGGCTACGTCTACATGACCGCGAGTCAGAAACGCGGCACGATCTACATCGGGGTGACCAACGACCTTGGCCGCCG
TATGCCCGAGCACAAGTCAGGCGAAGGCTCGCGCTTCACCAGCCAATACGGTGTGCAACGACTGGTCTGGTATGAGGAAT
ACTTCGACATCACCGACGCCATCCAGCGCGAGAAATCGTTGAAGCGCCGGCTGCGCCAATGGAAGATCGACCTGATCGAA
AAGGCGAATCCAGACTGGTTCGAACTGTTTCGCGGAACTGGATGGTGA

Upstream 100 bases:

>100_bases
GAAGCGACGCGTAGACCCTAGGATCCATGCCGTGACGTTGGCCTTAGAATGCAGCGGGTTCAGAATGGTCGCCAACTGTA
GCGCCGGCTAAAGTCGTCGC

Downstream 100 bases:

>100_bases
GGCCACCTCGCGCTTCGTCATCCTCGGGCCTGACCCGAGGATCCATGCCGTGACGACGGTCGTGGAATACGGCGGATCAG
AATTCTGGACCGTAGCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: Excinuclease ABC C Subunit Domain Protein; Endonuclease; Excinuclease ABC Subunit C Domain-Containing Protein; Excinuclease ABC C Subunit; Excinuclease ABC C Subunit Domain-Containing Protein; Excinuclease ABC C Subunit-Like Protein; Endonuclease Containing A URI Domain; Endo/Excinuclease Amino Terminal Domain-Containing Protein; Endo/Excinuclease Amino Terminal Domain Protein; GIY-YIG Catalytic Domain-Containing Protein; Endonuclease Protein; Crossover Junction Endodeoxyribonuclease RuvC; Excinuclease ABC; Endo/Excinuclease; GIY-YIG Endonuclease Domain-Containing Protein; Excinuclease ABCsubunit C Domain-Containing Protein; Excinuclease ABC C Subunit N-Terminal; GIY-YIG Catalytic Domain Protein

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MTGYVYMTASQKRGTIYIGVTNDLGRRMPEHKSGEGSRFTSQYGVQRLVWYEEYFDITDAIQREKSLKRRLRQWKIDLIE
KANPDWFELFRGTGW

Sequences:

>Translated_95_residues
MTGYVYMTASQKRGTIYIGVTNDLGRRMPEHKSGEGSRFTSQYGVQRLVWYEEYFDITDAIQREKSLKRRLRQWKIDLIE
KANPDWFELFRGTGW
>Mature_94_residues
TGYVYMTASQKRGTIYIGVTNDLGRRMPEHKSGEGSRFTSQYGVQRLVWYEEYFDITDAIQREKSLKRRLRQWKIDLIEK
ANPDWFELFRGTGW

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11359; Mature: 11228

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGYVYMTASQKRGTIYIGVTNDLGRRMPEHKSGEGSRFTSQYGVQRLVWYEEYFDITDA
CCCEEEEEECCCCCEEEEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHH
IQREKSLKRRLRQWKIDLIEKANPDWFELFRGTGW
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
>Mature Secondary Structure 
TGYVYMTASQKRGTIYIGVTNDLGRRMPEHKSGEGSRFTSQYGVQRLVWYEEYFDITDA
CCEEEEEECCCCCEEEEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHH
IQREKSLKRRLRQWKIDLIEKANPDWFELFRGTGW
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA