Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is cya3 [H]

Identifier: 13471884

GI number: 13471884

Start: 1641624

End: 1643081

Strand: Reverse

Name: cya3 [H]

Synonym: mll2000

Alternate gene names: 13471884

Gene position: 1643081-1641624 (Counterclockwise)

Preceding gene: 13471886

Following gene: 13471879

Centisome position: 23.35

GC content: 63.58

Gene sequence:

>1458_bases
GTGCCGATCGGGTCTGCCATGAGCCGCATCGCGACATCTTCGCCGGGTCACGACGCGCTGTCCGATCGGGAGCGCGCGGT
GGCTGAAAAATTCGCCGCCGGACTGACTTATCGCGAGATCGGCGAGGCGCTGTTCATCGCCCCCTCGACGGTGCGCACGC
ATCTCGCCTCGATCTACGACAAGCTCGGCGTGCGCAACAAAGTCGCGCTGGCCTCTCACATCAATGGAGCTATCGGCGCG
GGCATGGACGGGCCGCCGCGTTTGCCAGGCGCCTCTCCGGTGCTCGCCATATTCCCCATCGAATGCCAGACGTCGGAAGA
GCGATGGCGCCGCTTTGCCGACGGCCTGTCGTCGGACATCACCATCGACCTGGCGCGCTACGCGGACCTGCCGGTTATCG
CCTTCCACACCATGAAATCTCTGGGCAGCAAGCCAGCCGACTTCGCCGCCGACGGCAAGGCGCTTGGCGCCACCTATGTC
GTGTCGGGTCAACTGCGCGCCGACGAGCGGCGGGTTCGGTTATCAATAGAACTCGCCGACGCGGACAACGGCGTCAGCCT
GTGGAGCGAGCGCTATGACCGCCAGGTCGAGGATATTTTTGCGCTGCAGGACAGCCTGACCGAAACCGTCATCAATGTGA
TCGCCGGCAGCTACGGCGCGCTAGCCACGGTCGGCCGCAAAGCCATTCGCCGCAAACCGCCCGCCAGTCTGCGGGCCTAC
GACTGCTATCTGCTTGGCGTTGAACAGCAGGACACATTCAGCCGCGCTGGCATCGCGGAAGCGATACGCCTGTTTTCGCG
CGCGCTGGAACTTGACCCCACCCTGGTCAGGGCCTGGACCGCGCTTGCCTATGCCTATTCGATCGAGGGCGCCAACGGCT
TCGGCGACGATGCTCAGGTCTCGATCGAGAACTGGCGGACCGCGGTTGAAAACGCGATTCTGCTCGATCCGATGGACAGT
GTTGCCTGCAATTGCCTTGGCGATCTCAGGGGATGTCTCGGAGATCTCGAAGGAGCAGAGCGCGCGTATCGCCGCGCCTT
CGAATATGGCTCCAACCATGCCGATACACTGGCGATGCTTGCCGGCAGCAAGGCGCTAGTCGCAGGCGATCCAGCCGAGG
CGATGCCGCTCATCGAGCGCGCCATGCACCTCAATCCGCTGGCCCCACCTTGGTATTTCGGCATGCTGGGCCGCATCCTG
TTCACCCTCGGCAGGCACAGGGAAGCCATTGCGGCGCTGTGCAGAAGCACGCTAAATTCTCCGAATGTGCTGTTGTTTTT
GGCGCTGGCGCATACGTCCGTGGGCGAGGCCGCCGAGGCGGCCAGGATCGAAGCCCGCTTGAAAACCGAATTCGCGGACT
TTTCGGTCGAACGCTTCATCACCTGCTATCCCGTAACCAACCCCGACGCGGTGCATGCCATTCGCCACGCCGCCCAGCAA
CTGGCTAGGCGCGACTGA

Upstream 100 bases:

>100_bases
GGTAAGGAGCTTGCATTGCGTGCGCCTGCGTTGGGATCGGGCAGATGCTGTATTCGAGTTCCTGCATTTGTAGTATTTTG
CCCCGGCAACAGCTGAAACC

Downstream 100 bases:

>100_bases
GGCCTTCTGAAACGCCCGACCCGAGTTGACGGCGAAGACAAGTCACAAAAGCCCGCATGTCGGAACGAGGCGCTCTACCG
GTTAGCGTCTGCTTTCGCAG

Product: adenylate cyclase

Products: NA

Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MPIGSAMSRIATSSPGHDALSDRERAVAEKFAAGLTYREIGEALFIAPSTVRTHLASIYDKLGVRNKVALASHINGAIGA
GMDGPPRLPGASPVLAIFPIECQTSEERWRRFADGLSSDITIDLARYADLPVIAFHTMKSLGSKPADFAADGKALGATYV
VSGQLRADERRVRLSIELADADNGVSLWSERYDRQVEDIFALQDSLTETVINVIAGSYGALATVGRKAIRRKPPASLRAY
DCYLLGVEQQDTFSRAGIAEAIRLFSRALELDPTLVRAWTALAYAYSIEGANGFGDDAQVSIENWRTAVENAILLDPMDS
VACNCLGDLRGCLGDLEGAERAYRRAFEYGSNHADTLAMLAGSKALVAGDPAEAMPLIERAMHLNPLAPPWYFGMLGRIL
FTLGRHREAIAALCRSTLNSPNVLLFLALAHTSVGEAAEAARIEARLKTEFADFSVERFITCYPVTNPDAVHAIRHAAQQ
LARRD

Sequences:

>Translated_485_residues
MPIGSAMSRIATSSPGHDALSDRERAVAEKFAAGLTYREIGEALFIAPSTVRTHLASIYDKLGVRNKVALASHINGAIGA
GMDGPPRLPGASPVLAIFPIECQTSEERWRRFADGLSSDITIDLARYADLPVIAFHTMKSLGSKPADFAADGKALGATYV
VSGQLRADERRVRLSIELADADNGVSLWSERYDRQVEDIFALQDSLTETVINVIAGSYGALATVGRKAIRRKPPASLRAY
DCYLLGVEQQDTFSRAGIAEAIRLFSRALELDPTLVRAWTALAYAYSIEGANGFGDDAQVSIENWRTAVENAILLDPMDS
VACNCLGDLRGCLGDLEGAERAYRRAFEYGSNHADTLAMLAGSKALVAGDPAEAMPLIERAMHLNPLAPPWYFGMLGRIL
FTLGRHREAIAALCRSTLNSPNVLLFLALAHTSVGEAAEAARIEARLKTEFADFSVERFITCYPVTNPDAVHAIRHAAQQ
LARRD
>Mature_484_residues
PIGSAMSRIATSSPGHDALSDRERAVAEKFAAGLTYREIGEALFIAPSTVRTHLASIYDKLGVRNKVALASHINGAIGAG
MDGPPRLPGASPVLAIFPIECQTSEERWRRFADGLSSDITIDLARYADLPVIAFHTMKSLGSKPADFAADGKALGATYVV
SGQLRADERRVRLSIELADADNGVSLWSERYDRQVEDIFALQDSLTETVINVIAGSYGALATVGRKAIRRKPPASLRAYD
CYLLGVEQQDTFSRAGIAEAIRLFSRALELDPTLVRAWTALAYAYSIEGANGFGDDAQVSIENWRTAVENAILLDPMDSV
ACNCLGDLRGCLGDLEGAERAYRRAFEYGSNHADTLAMLAGSKALVAGDPAEAMPLIERAMHLNPLAPPWYFGMLGRILF
TLGRHREAIAALCRSTLNSPNVLLFLALAHTSVGEAAEAARIEARLKTEFADFSVERFITCYPVTNPDAVHAIRHAAQQL
ARRD

Specific function: Appears To Be The Positive Activator Of Uhpt Transcription. [C]

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]

EC number: =4.6.1.1 [H]

Molecular weight: Translated: 52493; Mature: 52362

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS50293 TPR_REGION ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIGSAMSRIATSSPGHDALSDRERAVAEKFAAGLTYREIGEALFIAPSTVRTHLASIYD
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCEEEECHHHHHHHHHHHHH
KLGVRNKVALASHINGAIGAGMDGPPRLPGASPVLAIFPIECQTSEERWRRFADGLSSDI
HHCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCE
TIDLARYADLPVIAFHTMKSLGSKPADFAADGKALGATYVVSGQLRADERRVRLSIELAD
EEEHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEEC
ADNGVSLWSERYDRQVEDIFALQDSLTETVINVIAGSYGALATVGRKAIRRKPPASLRAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEE
DCYLLGVEQQDTFSRAGIAEAIRLFSRALELDPTLVRAWTALAYAYSIEGANGFGDDAQV
EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCCCCCCEE
SIENWRTAVENAILLDPMDSVACNCLGDLRGCLGDLEGAERAYRRAFEYGSNHADTLAML
EHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHH
AGSKALVAGDPAEAMPLIERAMHLNPLAPPWYFGMLGRILFTLGRHREAIAALCRSTLNS
CCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
PNVLLFLALAHTSVGEAAEAARIEARLKTEFADFSVERFITCYPVTNPDAVHAIRHAAQQ
CCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCHHHHHHHHHHHH
LARRD
HHCCC
>Mature Secondary Structure 
PIGSAMSRIATSSPGHDALSDRERAVAEKFAAGLTYREIGEALFIAPSTVRTHLASIYD
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCEEEECHHHHHHHHHHHHH
KLGVRNKVALASHINGAIGAGMDGPPRLPGASPVLAIFPIECQTSEERWRRFADGLSSDI
HHCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCE
TIDLARYADLPVIAFHTMKSLGSKPADFAADGKALGATYVVSGQLRADERRVRLSIELAD
EEEHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEEC
ADNGVSLWSERYDRQVEDIFALQDSLTETVINVIAGSYGALATVGRKAIRRKPPASLRAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEE
DCYLLGVEQQDTFSRAGIAEAIRLFSRALELDPTLVRAWTALAYAYSIEGANGFGDDAQV
EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCCCCCCEE
SIENWRTAVENAILLDPMDSVACNCLGDLRGCLGDLEGAERAYRRAFEYGSNHADTLAML
EHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHH
AGSKALVAGDPAEAMPLIERAMHLNPLAPPWYFGMLGRILFTLGRHREAIAALCRSTLNS
CCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
PNVLLFLALAHTSVGEAAEAARIEARLKTEFADFSVERFITCYPVTNPDAVHAIRHAAQQ
CCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCHHHHHHHHHHHH
LARRD
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10485295; 11481432 [H]