Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13471838

Identifier: 13471838

GI number: 13471838

Start: 1598485

End: 1598790

Strand: Reverse

Name: 13471838

Synonym: mll1940

Alternate gene names: NA

Gene position: 1598790-1598485 (Counterclockwise)

Preceding gene: 13471843

Following gene: 13471836

Centisome position: 22.72

GC content: 58.17

Gene sequence:

>306_bases
ATGAACTGGAATCACTATTTTTTGCGATGCAGCATAGTCGCCGTCTTTCGTCGGCTGACCACGCGGCTTGCTTCCCTCAA
AAGCAGGCATCCGGCCAAGCTGCAGATGTTGGAAAGGCCTTCCACACGGCAAAGAAGCCGGGCCCGCCGGCGCCTCACAC
CGCCGCGCGGCGACCTCCAGCTTGCGATATATGTTGTTCATTTCAATTTTCAGCGTGTTTTTCGCAATGCCGATGTCGAA
TGCAACCCGAGGACTTCGCCGACTATTTCGGCCGGCAACCAGTGGCCGCCGGCGGCGACACGGTGA

Upstream 100 bases:

>100_bases
TGCTCATGGAGACAGGAAGCGTCCGAATTTTTGTTAAAAATATCTCGAAATTTGACAATCTACATTTTACCTATTTAGGC
TGGTTCGCGTTGTCCGGTGA

Downstream 100 bases:

>100_bases
ATGCATCGAAGCAACGTCCCGATCGCGGCCTCCTTCAGCACGATCCCTGCGACGCCGGCCTTGATCACCTCGTAGAGCTG
ACTTTGTGATGCGCCGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MNWNHYFLRCSIVAVFRRLTTRLASLKSRHPAKLQMLERPSTRQRSRARRRLTPPRGDLQLAIYVVHFNFQRVFRNADVE
CNPRTSPTISAGNQWPPAATR

Sequences:

>Translated_101_residues
MNWNHYFLRCSIVAVFRRLTTRLASLKSRHPAKLQMLERPSTRQRSRARRRLTPPRGDLQLAIYVVHFNFQRVFRNADVE
CNPRTSPTISAGNQWPPAATR
>Mature_101_residues
MNWNHYFLRCSIVAVFRRLTTRLASLKSRHPAKLQMLERPSTRQRSRARRRLTPPRGDLQLAIYVVHFNFQRVFRNADVE
CNPRTSPTISAGNQWPPAATR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11859; Mature: 11859

Theoretical pI: Translated: 12.45; Mature: 12.45

Prosite motif: PS00443 GATASE_TYPE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWNHYFLRCSIVAVFRRLTTRLASLKSRHPAKLQMLERPSTRQRSRARRRLTPPRGDLQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCEE
LAIYVVHFNFQRVFRNADVECNPRTSPTISAGNQWPPAATR
EEEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNWNHYFLRCSIVAVFRRLTTRLASLKSRHPAKLQMLERPSTRQRSRARRRLTPPRGDLQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCEE
LAIYVVHFNFQRVFRNADVECNPRTSPTISAGNQWPPAATR
EEEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA