| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471836
Identifier: 13471836
GI number: 13471836
Start: 1597158
End: 1597844
Strand: Reverse
Name: 13471836
Synonym: mll1937
Alternate gene names: NA
Gene position: 1597844-1597158 (Counterclockwise)
Preceding gene: 13471838
Following gene: 13471835
Centisome position: 22.71
GC content: 63.03
Gene sequence:
>687_bases ATGTCCCGCACCTACGATCTTGCATCCGATGTTATCCGGCGTGTCTATGAAAGGCGCATAGACGCGCCGGCGATCCTCGA TAGCGCCAGCGAATTTCCCAACGCGGCGAAATTCACCAATGCCTGGCGCGACATCCGCGATGAAGCGCTTGGCGTGCATC TGGGCAAGGTCCCGCGCTTCCACGACATCATGCCGGAGCAGGCCGATATCTCGGCCAATGACGGCCTCGACTGGCGCATG TTCGTGCTCAAGGCCTATGACATGGCGGTGCCGGAGAACCTGGCGCGGATGCCGGTTCTCAGCCGCTTGCTTGCCGAATG CCCGGAAGTCAAATCGGCCGCGATCTCGTTCCTGGCGCCGCGCAAGCACATACCCAGCCATCGTGGACCGTTCCGCGGCA TCATGCGGTTTCACCTTGGCCTGGTCATCCCGCGCCAGGCCGACGGCCGCCCGGCAACCATCATGATGATCGACCATCAG GAAAAACGCATCACCGACGGCGAAGGCATGCTGTGGGACGACACCTATCCGCACGAGGTGATGAACAACGCCGATGAAAC GCGCATAGCCCTGTTGCTGGATGTCTGGCGTCCGGGCATGCCCTGGGACATGGAAATGCTGTCCCGGCTGATCGTGCGCG GCGTGCAGGCGGGCATGCGCCGCCGGGGCGTGTCGTTCAGCGGCTGA
Upstream 100 bases:
>100_bases CGTCGCCGTGACGACCCGGCTGGGCTGCGCACGGCGTCGTGAACAAAATGTGTAACCAAAATCGGGGGCCGTCCGTTTAT GATGCAACGGAGGCCGTGAG
Downstream 100 bases:
>100_bases AGCGGGGGAGGGCGCCGGCGCGCCTCGACACCTGTCCTGACCTATCAAGCCGTCCGCGCTGCCTCACGACAGGCGGGCCG GTTCGGCCTAATCCCATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Hydroxylase; Asparaginyl Beta-Hydroxylase; Membrane-Bound Beta-Hydroxylase; Lipid A-Myristate Beta-Hydroxylase; Aspartyl-Asparaginyl Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Lipopolysaccharide Biosynthetic; Peptide-Aspartate Beta-Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Transmembrane Protein; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Peptide Aspartate B-Dioxygenase; Aspartyl/Asparaginyl-Beta-Hydroxylase; Hydroxylase; Peptide-Aspartate B-Dioxygenase; Aspartate Beta-Hydroxylase; Lipopolysaccharide Biosynthetic Protein; Fe(2+)/Alpha-Ketoglutarate-Dependent Dioxygenase LpxO; Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Protein
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSRTYDLASDVIRRVYERRIDAPAILDSASEFPNAAKFTNAWRDIRDEALGVHLGKVPRFHDIMPEQADISANDGLDWRM FVLKAYDMAVPENLARMPVLSRLLAECPEVKSAAISFLAPRKHIPSHRGPFRGIMRFHLGLVIPRQADGRPATIMMIDHQ EKRITDGEGMLWDDTYPHEVMNNADETRIALLLDVWRPGMPWDMEMLSRLIVRGVQAGMRRRGVSFSG
Sequences:
>Translated_228_residues MSRTYDLASDVIRRVYERRIDAPAILDSASEFPNAAKFTNAWRDIRDEALGVHLGKVPRFHDIMPEQADISANDGLDWRM FVLKAYDMAVPENLARMPVLSRLLAECPEVKSAAISFLAPRKHIPSHRGPFRGIMRFHLGLVIPRQADGRPATIMMIDHQ EKRITDGEGMLWDDTYPHEVMNNADETRIALLLDVWRPGMPWDMEMLSRLIVRGVQAGMRRRGVSFSG >Mature_227_residues SRTYDLASDVIRRVYERRIDAPAILDSASEFPNAAKFTNAWRDIRDEALGVHLGKVPRFHDIMPEQADISANDGLDWRMF VLKAYDMAVPENLARMPVLSRLLAECPEVKSAAISFLAPRKHIPSHRGPFRGIMRFHLGLVIPRQADGRPATIMMIDHQE KRITDGEGMLWDDTYPHEVMNNADETRIALLLDVWRPGMPWDMEMLSRLIVRGVQAGMRRRGVSFSG
Specific function: Unknown
COG id: COG3555
COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI258613943, Length=162, Percent_Identity=28.3950617283951, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI14589866, Length=162, Percent_Identity=28.3950617283951, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24654024, Length=169, Percent_Identity=31.3609467455621, Blast_Score=83, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25992; Mature: 25861
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTYDLASDVIRRVYERRIDAPAILDSASEFPNAAKFTNAWRDIRDEALGVHLGKVPRF CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCH HDIMPEQADISANDGLDWRMFVLKAYDMAVPENLARMPVLSRLLAECPEVKSAAISFLAP HHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCC RKHIPSHRGPFRGIMRFHLGLVIPRQADGRPATIMMIDHQEKRITDGEGMLWDDTYPHEV HHCCCCCCCHHHHHHHHHHHEEECCCCCCCCEEEEEEECCHHHCCCCCCEEECCCCCHHH MNNADETRIALLLDVWRPGMPWDMEMLSRLIVRGVQAGMRRRGVSFSG HCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SRTYDLASDVIRRVYERRIDAPAILDSASEFPNAAKFTNAWRDIRDEALGVHLGKVPRF CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCH HDIMPEQADISANDGLDWRMFVLKAYDMAVPENLARMPVLSRLLAECPEVKSAAISFLAP HHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCC RKHIPSHRGPFRGIMRFHLGLVIPRQADGRPATIMMIDHQEKRITDGEGMLWDDTYPHEV HHCCCCCCCHHHHHHHHHHHEEECCCCCCCCEEEEEEECCHHHCCCCCCEEECCCCCHHH MNNADETRIALLLDVWRPGMPWDMEMLSRLIVRGVQAGMRRRGVSFSG HCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA