Click here to switch to the map view.

The map label for this gene is uidR [C]

Identifier: 13471824

GI number: 13471824

Start: 1580654

End: 1581271

Strand: Reverse

Name: uidR [C]

Synonym: mll1924

Alternate gene names: 13471824

Gene position: 1581271-1580654 (Counterclockwise)

Preceding gene: 13471828

Following gene: 13471823

Centisome position: 22.47

GC content: 67.31

Gene sequence:

>618_bases
GTGGAGAAAAAATTGGCCGAAGCCGTCATCGCTGAAGACACCGCCGCGGAACCCAAGCCGCTGCGCGCCGATGCCCAGCG
CAACCGCGACCGGCTGGTCGAGGTGGCGGCTTCGGTATTTGCCGAGCGCGGCATCGATGCCTCGCTGGAGGAGATCGCGC
GCCGTGCCGGCGTCGGCATCGGCACGCTCTACCGGCATTTCCCGACGCGCGAGCATCTGGTCGAGGTGGTCTACCGCCGC
GAGGTCGAGGCGCTGTGCGCCGCCGCCGCCGAGCTTGCCCAAAAACATCCCTCCGATGTCGCGCTCGAGGTGTGGATGCG
GCGCTTCGTCGACTACATCGCCACCAAGCGCGGCCTGGCGACCAGCCTGCGCATCCTGCTGACAACCAATTCCACCCTGT
TCTCCGACACGTCGGGGCGGGTCTCGCAAGCCTTGCGACAATTGGTCGAGGCGGCGGTGGCCGACGGTACCATCCGTGAC
GATGTCGATGCCTCGGATGTGCTGCACGCACTTGGTGGCATCTATTCCGCGCCCGACACGCCGGAGTGGCGCGACCGTTC
GCGCCGGCTGGTCAAGCTCTTGATGGACGGGCTGCGGTTCGGGGCGGGAAAGGGGTGA

Upstream 100 bases:

>100_bases
TCCCTGCCTATATGATGAAAGCACTCCACTTAAAGCGGAGGTGCCTCCGTTTGTTACGTGGGGGCTGGCCCGGCTGGGTT
CAAGTCCCGATATTTTGTCC

Downstream 100 bases:

>100_bases
CATCGTGGATGACCTCAGCCTGCTGCTGACAAGGTTCGTCAGCGGGGAGGACACCAGCCTGGCAACCGCGGACAGCTTGG
AGGTGTTGCTCGACGAGGCC

Product: transcription regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulatory Protein; TetR Family Transcriptional Regulatory Protein; Transcription Regulator Protein; TetR-Type Regulator; TetR Family Protein Transcriptional Regulator; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; Transcriptional Regulator Tetr Family; Transcription Regulator Protein Tetr Family; Regulatory Protein; TetR Family Transcription Regulator Protein; Transcriptional Regulator Protein; Transcription Regulator; TetR-Family Protein Transcriptional Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MEKKLAEAVIAEDTAAEPKPLRADAQRNRDRLVEVAASVFAERGIDASLEEIARRAGVGIGTLYRHFPTREHLVEVVYRR
EVEALCAAAAELAQKHPSDVALEVWMRRFVDYIATKRGLATSLRILLTTNSTLFSDTSGRVSQALRQLVEAAVADGTIRD
DVDASDVLHALGGIYSAPDTPEWRDRSRRLVKLLMDGLRFGAGKG

Sequences:

>Translated_205_residues
MEKKLAEAVIAEDTAAEPKPLRADAQRNRDRLVEVAASVFAERGIDASLEEIARRAGVGIGTLYRHFPTREHLVEVVYRR
EVEALCAAAAELAQKHPSDVALEVWMRRFVDYIATKRGLATSLRILLTTNSTLFSDTSGRVSQALRQLVEAAVADGTIRD
DVDASDVLHALGGIYSAPDTPEWRDRSRRLVKLLMDGLRFGAGKG
>Mature_205_residues
MEKKLAEAVIAEDTAAEPKPLRADAQRNRDRLVEVAASVFAERGIDASLEEIARRAGVGIGTLYRHFPTREHLVEVVYRR
EVEALCAAAAELAQKHPSDVALEVWMRRFVDYIATKRGLATSLRILLTTNSTLFSDTSGRVSQALRQLVEAAVADGTIRD
DVDASDVLHALGGIYSAPDTPEWRDRSRRLVKLLMDGLRFGAGKG

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22553; Mature: 22553

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKLAEAVIAEDTAAEPKPLRADAQRNRDRLVEVAASVFAERGIDASLEEIARRAGVGI
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCH
GTLYRHFPTREHLVEVVYRREVEALCAAAAELAQKHPSDVALEVWMRRFVDYIATKRGLA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
TSLRILLTTNSTLFSDTSGRVSQALRQLVEAAVADGTIRDDVDASDVLHALGGIYSAPDT
HHHHHHEECCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC
PEWRDRSRRLVKLLMDGLRFGAGKG
CCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEKKLAEAVIAEDTAAEPKPLRADAQRNRDRLVEVAASVFAERGIDASLEEIARRAGVGI
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCH
GTLYRHFPTREHLVEVVYRREVEALCAAAAELAQKHPSDVALEVWMRRFVDYIATKRGLA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
TSLRILLTTNSTLFSDTSGRVSQALRQLVEAAVADGTIRDDVDASDVLHALGGIYSAPDT
HHHHHHEECCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC
PEWRDRSRRLVKLLMDGLRFGAGKG
CCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA