Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13471823

Identifier: 13471823

GI number: 13471823

Start: 1580413

End: 1580649

Strand: Reverse

Name: 13471823

Synonym: msl1923

Alternate gene names: NA

Gene position: 1580649-1580413 (Counterclockwise)

Preceding gene: 13471824

Following gene: 13471822

Centisome position: 22.46

GC content: 59.07

Gene sequence:

>237_bases
GTGGATGACCTCAGCCTGCTGCTGACAAGGTTCGTCAGCGGGGAGGACACCAGCCTGGCAACCGCGGACAGCTTGGAGGT
GTTGCTCGACGAGGCCTATCCTGATGACGAGGTTGTTCAAAATGCGGTTATAGCTCTTGCCAGCTACAGACCCGGTGGCG
GCCCGTTTCTGTTTGACACGTCGGAGATTCAACGGCGCCTGCTTCGTCTTCGCGACTATCTCTCGCGCCGCACCTAA

Upstream 100 bases:

>100_bases
TATTCCGCGCCCGACACGCCGGAGTGGCGCGACCGTTCGCGCCGGCTGGTCAAGCTCTTGATGGACGGGCTGCGGTTCGG
GGCGGGAAAGGGGTGACATC

Downstream 100 bases:

>100_bases
AGAGACCTAGGGCGGACTTGGACTGTGGACTTGCATCTGAATGCGGGCGGTTGTTAAAATCCTCACATTTCAGGATGCAC
AGGCCCAACGCATGACGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MDDLSLLLTRFVSGEDTSLATADSLEVLLDEAYPDDEVVQNAVIALASYRPGGGPFLFDTSEIQRRLLRLRDYLSRRT

Sequences:

>Translated_78_residues
MDDLSLLLTRFVSGEDTSLATADSLEVLLDEAYPDDEVVQNAVIALASYRPGGGPFLFDTSEIQRRLLRLRDYLSRRT
>Mature_78_residues
MDDLSLLLTRFVSGEDTSLATADSLEVLLDEAYPDDEVVQNAVIALASYRPGGGPFLFDTSEIQRRLLRLRDYLSRRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8749; Mature: 8749

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDLSLLLTRFVSGEDTSLATADSLEVLLDEAYPDDEVVQNAVIALASYRPGGGPFLFDT
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEECH
SEIQRRLLRLRDYLSRRT
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDDLSLLLTRFVSGEDTSLATADSLEVLLDEAYPDDEVVQNAVIALASYRPGGGPFLFDT
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEECH
SEIQRRLLRLRDYLSRRT
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA