| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471766
Identifier: 13471766
GI number: 13471766
Start: 1525163
End: 1525888
Strand: Reverse
Name: 13471766
Synonym: mll1845
Alternate gene names: NA
Gene position: 1525888-1525163 (Counterclockwise)
Preceding gene: 13471767
Following gene: 13471763
Centisome position: 21.69
GC content: 71.07
Gene sequence:
>726_bases ATGATCGTCCAGGCCTGCATCAATGGAGCGCGCGCGCGCGATTTTCACCCGAAGCTGCCGCTGACGGCGCAGGCCATGGC CAGCGATGCGGTTGCCTGCGTCGCGGCCGGTGCTGGCGAACTGCACATCCATCCGCGCGGCGCCGATGGGCGTGAAAGCC TGGCCGCCGTCGATGCGACGGTGCTGGCCGTGCGCCGGGCCTGCCCGGGCACGCTGGTCGGCGTGTCGACCGGCGCCTGG ATCGAGAACGATGTCGCGCGCACCCGCGCGGCGACCTCCGGCTGGCGCGAGTTGCCCGACTATGCCTCGGTCAACCTCTC CGAGGCCGATGCGCCCGCCTTGATGGAGCTGCTGCGCCAGCGCGGCGTCGGCATCGAGGCCGGGCTCGCCACGACAGAAG ACGCCGAGCGGTTCGTGGCGCTCACCGGCCACGACCGGGTGCTGCGCATCCTGATCGAGATCGACATACCGGACCTCGCC GCAGCACTTGACGAGGCAACCGGCATCGCCGCCGTGCTCAAGCGCACCGAAGTGCGGCGGCCGATCCTGCTGCACGGCGT GGACGCCACCGTCTGGCCGTTCGTCGAGCTAGCCCGCCAAAAGCGCTGGTCGACGCGCGTCGGGCTGGAAGACGGCAGGA CGCTGGCGGATGGAACGGTGGCGAAGGACAATGCGGAGATCGTCGCGGCTGCGGCGGCGGTTTTCCGCTCCGCGTCCGCC GGCTGA
Upstream 100 bases:
>100_bases ATGGGGGCGGGGCCGCACTGTCAGGAGAGACGCCGCGCTACTCTTTGCCCTGCCTTGTCGCGCGGCTAGACTGCCGTCTC CCTTGTCCAAGGTGGCATCC
Downstream 100 bases:
>100_bases ATGGCGGTCTGCCTCAGCTGTGCTTGCGGACAGGTGCTGTCCAGCTGCGCAAAATGTGTTTCTGGATCTTGCCGGATGCG GTGCGCGGCAGTGCATCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MIVQACINGARARDFHPKLPLTAQAMASDAVACVAAGAGELHIHPRGADGRESLAAVDATVLAVRRACPGTLVGVSTGAW IENDVARTRAATSGWRELPDYASVNLSEADAPALMELLRQRGVGIEAGLATTEDAERFVALTGHDRVLRILIEIDIPDLA AALDEATGIAAVLKRTEVRRPILLHGVDATVWPFVELARQKRWSTRVGLEDGRTLADGTVAKDNAEIVAAAAAVFRSASA G
Sequences:
>Translated_241_residues MIVQACINGARARDFHPKLPLTAQAMASDAVACVAAGAGELHIHPRGADGRESLAAVDATVLAVRRACPGTLVGVSTGAW IENDVARTRAATSGWRELPDYASVNLSEADAPALMELLRQRGVGIEAGLATTEDAERFVALTGHDRVLRILIEIDIPDLA AALDEATGIAAVLKRTEVRRPILLHGVDATVWPFVELARQKRWSTRVGLEDGRTLADGTVAKDNAEIVAAAAAVFRSASA G >Mature_241_residues MIVQACINGARARDFHPKLPLTAQAMASDAVACVAAGAGELHIHPRGADGRESLAAVDATVLAVRRACPGTLVGVSTGAW IENDVARTRAATSGWRELPDYASVNLSEADAPALMELLRQRGVGIEAGLATTEDAERFVALTGHDRVLRILIEIDIPDLA AALDEATGIAAVLKRTEVRRPILLHGVDATVWPFVELARQKRWSTRVGLEDGRTLADGTVAKDNAEIVAAAAAVFRSASA G
Specific function: Unknown
COG id: COG3246
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25340; Mature: 25340
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVQACINGARARDFHPKLPLTAQAMASDAVACVAAGAGELHIHPRGADGRESLAAVDAT CEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHH VLAVRRACPGTLVGVSTGAWIENDVARTRAATSGWRELPDYASVNLSEADAPALMELLRQ HHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHH RGVGIEAGLATTEDAERFVALTGHDRVLRILIEIDIPDLAAALDEATGIAAVLKRTEVRR CCCCEECCCCCCCCCCCEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCC PILLHGVDATVWPFVELARQKRWSTRVGLEDGRTLADGTVAKDNAEIVAAAAAVFRSASA CEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCC G C >Mature Secondary Structure MIVQACINGARARDFHPKLPLTAQAMASDAVACVAAGAGELHIHPRGADGRESLAAVDAT CEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCEEEEECCCCCCHHHHHHHHHH VLAVRRACPGTLVGVSTGAWIENDVARTRAATSGWRELPDYASVNLSEADAPALMELLRQ HHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHH RGVGIEAGLATTEDAERFVALTGHDRVLRILIEIDIPDLAAALDEATGIAAVLKRTEVRR CCCCEECCCCCCCCCCCEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCC PILLHGVDATVWPFVELARQKRWSTRVGLEDGRTLADGTVAKDNAEIVAAAAAVFRSASA CEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA