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The map label for this gene is 13471531

Identifier: 13471531

GI number: 13471531

Start: 1270110

End: 1270847

Strand: Direct

Name: 13471531

Synonym: mlr1532

Alternate gene names: NA

Gene position: 1270110-1270847 (Clockwise)

Preceding gene: 13471527

Following gene: 13471532

Centisome position: 18.05

GC content: 62.06

Gene sequence:

>738_bases
ATGGTCCGTGAGCTCAGTTCTACTGCACGCAGTAGAACGGGGAAGCGCAGAAAACGCCATCAGATGGCCGCCAGAGTAGA
ATTTCCAAACAGGCTCCAAGACTGTCGCACCGGCGCGGCATCGAGCCGGCGCGATGATTTCTGCAGGCGGACTTTTGTAA
TGATGCGTTCTATCCTGGTCGGCATTCTCGTCCTGATGGCAGCCGGCATCGGCTGGCTGACCTTCGACTGGTATCGCGGC
CATTATGGCGGCGAACCGTTCGGCGCGCCCTTCACCCTCGTGGACCAGAAAGGCGCACCTATCACCGAAGCCGCCTTCCG
GGGGCAGCCCAGCGTCGTCTTCTTCGGCTTCACCCACTGCCCCGAGGTTTGCCCAACCACCCTGTTCGAACTGTCCGGCT
GGCTGAAGACGCTCGGCGACGACGGCAAGACCTTGCATGCCTATTTCGTCTCGGTCGACCCGGAGCGTGACACGCCGGCG
GTGATGAACGCCTATGTGAGCAATTTCTCCGACCGTATCACCGGCATCACCGGCGACCCGGACAAGGTCCATGCCATGGC
CAAGTCGTTCGGCATCTACTGGAAGAAGGTCGACACGGGCGACGGCGACTACACGATGGACCACACGGCCTCGGTGCTGC
TGCTCAACTCCAAGGGCGACTTTGCCGGCACGATCGCCTATGGCGAAAGCGCCAGCGCCGCCGTGGAGAAGCTGAAGCGC
CTCGCGGCCAAGGGTTGA

Upstream 100 bases:

>100_bases
CACTTTGCCTGCGCAAGGCCAAACCGCTAAGAGACTGTTTCGAAATTCGCTCTGGCGAGTCATATGGTGGTGGTTTCGAG
AACCGTAGCGCAGCGGACAT

Downstream 100 bases:

>100_bases
CAAGAATTCATATGACCCAGACGCGGCTGCATTTCACCACCGGCAAGATCGAGGCTGAGCGCATTTTCGCGGCGCTTGAG
CTGGCCTTCGAGGATGAAGG

Product: inner mitochondrial membrane protein Sco1p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MVRELSSTARSRTGKRRKRHQMAARVEFPNRLQDCRTGAASSRRDDFCRRTFVMMRSILVGILVLMAAGIGWLTFDWYRG
HYGGEPFGAPFTLVDQKGAPITEAAFRGQPSVVFFGFTHCPEVCPTTLFELSGWLKTLGDDGKTLHAYFVSVDPERDTPA
VMNAYVSNFSDRITGITGDPDKVHAMAKSFGIYWKKVDTGDGDYTMDHTASVLLLNSKGDFAGTIAYGESASAAVEKLKR
LAAKG

Sequences:

>Translated_245_residues
MVRELSSTARSRTGKRRKRHQMAARVEFPNRLQDCRTGAASSRRDDFCRRTFVMMRSILVGILVLMAAGIGWLTFDWYRG
HYGGEPFGAPFTLVDQKGAPITEAAFRGQPSVVFFGFTHCPEVCPTTLFELSGWLKTLGDDGKTLHAYFVSVDPERDTPA
VMNAYVSNFSDRITGITGDPDKVHAMAKSFGIYWKKVDTGDGDYTMDHTASVLLLNSKGDFAGTIAYGESASAAVEKLKR
LAAKG
>Mature_245_residues
MVRELSSTARSRTGKRRKRHQMAARVEFPNRLQDCRTGAASSRRDDFCRRTFVMMRSILVGILVLMAAGIGWLTFDWYRG
HYGGEPFGAPFTLVDQKGAPITEAAFRGQPSVVFFGFTHCPEVCPTTLFELSGWLKTLGDDGKTLHAYFVSVDPERDTPA
VMNAYVSNFSDRITGITGDPDKVHAMAKSFGIYWKKVDTGDGDYTMDHTASVLLLNSKGDFAGTIAYGESASAAVEKLKR
LAAKG

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=146, Percent_Identity=37.6712328767123, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI281182722, Length=146, Percent_Identity=37.6712328767123, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI281182716, Length=146, Percent_Identity=37.6712328767123, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI153791313, Length=146, Percent_Identity=37.6712328767123, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI4759068, Length=148, Percent_Identity=35.1351351351351, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17531419, Length=156, Percent_Identity=30.1282051282051, Blast_Score=90, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6319498, Length=161, Percent_Identity=34.7826086956522, Blast_Score=122, Evalue=6e-29,
Organism=Saccharomyces cerevisiae, GI6319511, Length=161, Percent_Identity=36.0248447204969, Blast_Score=112, Evalue=4e-26,
Organism=Drosophila melanogaster, GI19920710, Length=144, Percent_Identity=33.3333333333333, Blast_Score=99, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 26994; Mature: 26994

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRELSSTARSRTGKRRKRHQMAARVEFPNRLQDCRTGAASSRRDDFCRRTFVMMRSILV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GILVLMAAGIGWLTFDWYRGHYGGEPFGAPFTLVDQKGAPITEAAFRGQPSVVFFGFTHC
HHHHHHHCCCCCEEEHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCCEEEEECCCC
PEVCPTTLFELSGWLKTLGDDGKTLHAYFVSVDPERDTPAVMNAYVSNFSDRITGITGDP
CHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCH
DKVHAMAKSFGIYWKKVDTGDGDYTMDHTASVLLLNSKGDFAGTIAYGESASAAVEKLKR
HHHHHHHHHHCEEEEEEECCCCCEEECCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHH
LAAKG
HHCCC
>Mature Secondary Structure
MVRELSSTARSRTGKRRKRHQMAARVEFPNRLQDCRTGAASSRRDDFCRRTFVMMRSILV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
GILVLMAAGIGWLTFDWYRGHYGGEPFGAPFTLVDQKGAPITEAAFRGQPSVVFFGFTHC
HHHHHHHCCCCCEEEHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCCEEEEECCCC
PEVCPTTLFELSGWLKTLGDDGKTLHAYFVSVDPERDTPAVMNAYVSNFSDRITGITGDP
CHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCH
DKVHAMAKSFGIYWKKVDTGDGDYTMDHTASVLLLNSKGDFAGTIAYGESASAAVEKLKR
HHHHHHHHHHCEEEEEEECCCCCEEECCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHH
LAAKG
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]