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The map label for this gene is ucpA [C]

Identifier: 13471527

GI number: 13471527

Start: 1267049

End: 1267915

Strand: Direct

Name: ucpA [C]

Synonym: mlr1526

Alternate gene names: 13471527

Gene position: 1267049-1267915 (Clockwise)

Preceding gene: 13471525

Following gene: 13471531

Centisome position: 18.01

GC content: 64.59

Gene sequence:

>867_bases
ATGATCACCGACGCCGAAATCCAGACCGCCCTGCCCGCGCTTGGCCCGGGCAACACCGCCGTCATCACCGGCGCCGCCAG
CGGCATCGGTCTGGCAGCCGCCAGGCGGCTTGCACTGATGGGCATGAAGATCGTGCTTGCCGACATTGCCGGCGCGCGCC
TTGATGATGCCTCTGGCGCCGTCTCGGCCATTGCAGGCGACGATGCCGTGCTTGCCGTCGCCGCCGATGTTTCGAAGGCC
GATGAGGTCGATCGTCTCGCCGACCGGGCATTCGGCGCCTTCGGCGAGGTCTCGCTGCTGATGAACAATGCCGGCGTCGG
CGACAATCCGGGAAAACCCTGGGAAAACCGCGATGGCTGGAAACGGCTGCTCGACATTAATTTCTGGGGTGTTGTGCATG
GCGTCGAAGCCTTCGCGCCGCGCATGCTGGCGTCGGCCAAGCCGGGCCTGATCATCAACACCGGTTCCAAGCAAGGCATC
ACCACGCCGCCCGGCAACCTCGCCTACAATGTCTCCAAGGCCGGCGTGAAGACATTCACCGAAGGCCTGGCGCACGCGCT
GCGCAACGAACCGGGCGACCGAATGTCGGCGCATCTGCTGATCCCCGGCTTCACCTATACCGGCCTCACCGAGGGTGCGA
CGGAGAAGCCCGCCGGCGCCTGGACCGGCGAACAGGTCATTGATTTCATGCTGGAATCCCTGGTCAGGGGCGACTTCTAC
ATCCTGTGCCCGGACAATGACGTGGCGCGGCCGCTGGACGAGAAACGCATGGCCTGGGCAATTGGCGACATCATCCAGAA
CCGCCCTGCTCTGTCGCGCTGGCACCCCGATCACAAGGATGCGTTCGCGGCCTTCATCAAAGGTTGA

Upstream 100 bases:

>100_bases
CGCGGCCCTGCTGGTCAACCCGAAGACCTGCTGACGAAGGCTTGCGCAAGCCCGTTCCGGCGCTAAGTTCGGCGCCATCG
AGAAAAGGACGCTGTTGCTC

Downstream 100 bases:

>100_bases
TCCGAAAGCCCTCAAGCCGCGTGCTTTTTCGGAGCTCGCTTTTGCGCCACGGCCTTCTTAGCGGCCATGGCGGCGATTTT
TTCGTCATGCCGCCGTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MITDAEIQTALPALGPGNTAVITGAASGIGLAAARRLALMGMKIVLADIAGARLDDASGAVSAIAGDDAVLAVAADVSKA
DEVDRLADRAFGAFGEVSLLMNNAGVGDNPGKPWENRDGWKRLLDINFWGVVHGVEAFAPRMLASAKPGLIINTGSKQGI
TTPPGNLAYNVSKAGVKTFTEGLAHALRNEPGDRMSAHLLIPGFTYTGLTEGATEKPAGAWTGEQVIDFMLESLVRGDFY
ILCPDNDVARPLDEKRMAWAIGDIIQNRPALSRWHPDHKDAFAAFIKG

Sequences:

>Translated_288_residues
MITDAEIQTALPALGPGNTAVITGAASGIGLAAARRLALMGMKIVLADIAGARLDDASGAVSAIAGDDAVLAVAADVSKA
DEVDRLADRAFGAFGEVSLLMNNAGVGDNPGKPWENRDGWKRLLDINFWGVVHGVEAFAPRMLASAKPGLIINTGSKQGI
TTPPGNLAYNVSKAGVKTFTEGLAHALRNEPGDRMSAHLLIPGFTYTGLTEGATEKPAGAWTGEQVIDFMLESLVRGDFY
ILCPDNDVARPLDEKRMAWAIGDIIQNRPALSRWHPDHKDAFAAFIKG
>Mature_288_residues
MITDAEIQTALPALGPGNTAVITGAASGIGLAAARRLALMGMKIVLADIAGARLDDASGAVSAIAGDDAVLAVAADVSKA
DEVDRLADRAFGAFGEVSLLMNNAGVGDNPGKPWENRDGWKRLLDINFWGVVHGVEAFAPRMLASAKPGLIINTGSKQGI
TTPPGNLAYNVSKAGVKTFTEGLAHALRNEPGDRMSAHLLIPGFTYTGLTEGATEKPAGAWTGEQVIDFMLESLVRGDFY
ILCPDNDVARPLDEKRMAWAIGDIIQNRPALSRWHPDHKDAFAAFIKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI25282469, Length=224, Percent_Identity=29.9107142857143, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI40807363, Length=200, Percent_Identity=29.5, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI31542939, Length=199, Percent_Identity=30.6532663316583, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI7706318, Length=194, Percent_Identity=24.7422680412371, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1789208, Length=222, Percent_Identity=28.3783783783784, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87082100, Length=204, Percent_Identity=32.843137254902, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787335, Length=222, Percent_Identity=27.9279279279279, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI25147288, Length=202, Percent_Identity=31.6831683168317, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=244, Percent_Identity=31.1475409836066, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17561402, Length=196, Percent_Identity=28.0612244897959, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=201, Percent_Identity=30.8457711442786, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17567345, Length=206, Percent_Identity=25.2427184466019, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI193204405, Length=220, Percent_Identity=30.4545454545455, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=206, Percent_Identity=30.0970873786408, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193203117, Length=231, Percent_Identity=26.8398268398268, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=195, Percent_Identity=27.1794871794872, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193203115, Length=231, Percent_Identity=26.8398268398268, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17560332, Length=217, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17562904, Length=198, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17562906, Length=201, Percent_Identity=29.8507462686567, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24644339, Length=256, Percent_Identity=27.34375, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI281364892, Length=210, Percent_Identity=30.4761904761905, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI28571526, Length=167, Percent_Identity=31.7365269461078, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21357041, Length=169, Percent_Identity=31.9526627218935, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI23397609, Length=189, Percent_Identity=30.6878306878307, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI161076933, Length=194, Percent_Identity=28.8659793814433, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24584748, Length=194, Percent_Identity=28.8659793814433, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI21358495, Length=243, Percent_Identity=22.6337448559671, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24640442, Length=203, Percent_Identity=29.064039408867, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 30298; Mature: 30298

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITDAEIQTALPALGPGNTAVITGAASGIGLAAARRLALMGMKIVLADIAGARLDDASGA
CCCCHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VSAIAGDDAVLAVAADVSKADEVDRLADRAFGAFGEVSLLMNNAGVGDNPGKPWENRDGW
EEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHH
KRLLDINFWGVVHGVEAFAPRMLASAKPGLIINTGSKQGITTPPGNLAYNVSKAGVKTFT
HHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEECHHHHHHHHH
EGLAHALRNEPGDRMSAHLLIPGFTYTGLTEGATEKPAGAWTGEQVIDFMLESLVRGDFY
HHHHHHHHCCCCCCCEEEEEECCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
ILCPDNDVARPLDEKRMAWAIGDIIQNRPALSRWHPDHKDAFAAFIKG
EEECCCCHHCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MITDAEIQTALPALGPGNTAVITGAASGIGLAAARRLALMGMKIVLADIAGARLDDASGA
CCCCHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VSAIAGDDAVLAVAADVSKADEVDRLADRAFGAFGEVSLLMNNAGVGDNPGKPWENRDGW
EEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHH
KRLLDINFWGVVHGVEAFAPRMLASAKPGLIINTGSKQGITTPPGNLAYNVSKAGVKTFT
HHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEECHHHHHHHHH
EGLAHALRNEPGDRMSAHLLIPGFTYTGLTEGATEKPAGAWTGEQVIDFMLESLVRGDFY
HHHHHHHHCCCCCCCEEEEEECCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
ILCPDNDVARPLDEKRMAWAIGDIIQNRPALSRWHPDHKDAFAAFIKG
EEECCCCHHCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA