| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471485
Identifier: 13471485
GI number: 13471485
Start: 1222760
End: 1223311
Strand: Direct
Name: 13471485
Synonym: mlr1469
Alternate gene names: NA
Gene position: 1222760-1223311 (Clockwise)
Preceding gene: 13471482
Following gene: 13471487
Centisome position: 17.38
GC content: 62.5
Gene sequence:
>552_bases ATGCAAAACGATTTCGATCGAGTCTTCGTGCTGACCGGTGGCCCGGGCTCCGGCAAGACCACTTTGATCGCAGCCCTGCG TCGGGCAGGCTTCGCGACTTCAGTCGTAGCCGGGCGTGGCATCGTCCGCGACCAGTCCTCGATAGGCGGAACCGCCCTGC CCTGGAGCGACCGCACACTGTTCGCCGAACTCATGCTGTCCTGGGAGATGCGCTCATATCAGAACGCGGTCGAACAGAAG GGACCGGTCTTCTTCGATCGCGGCGTGCCGGAAACGCTCGGCTATCTCAGGCTGAGCGGCCTGCCCGTGGCGGACCACGT CAGTACCGCCGCCAAGCGCTTCCGCTACAATCCGCGCGTGTTCATCGCTCCGCCCTGGCCTGACATTTTCGCGCAGGATG AGGAGCGCAAGCAGACGCCAGACGAGGCCAAGTGCACTTATCATGCGTTGGCCGAAATCTATACGGAGCTGGGTTACGAG CTGGTTCCGCTGCCCCTGGCGCCGGTCGAGACAAGGCTGCGTTTCGTATTGGCCGACGCAGGGTTGAATTAA
Upstream 100 bases:
>100_bases CCATGTCACGCGCAACCGCGGCCTTTTTTGCCGTCCGGACTGCGCACGGCCTTTGGCCGCGAAGCCGCCGCATCGCGTGT CTCTTTCTCCAGGCCAAGAA
Downstream 100 bases:
>100_bases AAAAGGCCGGGAAAACCCGGCCTTTTCATGCGCTTGCGAGCAGTGCCTACTCCGCCGGCGCTTCCACCGCCTCGCGCGAA CGGCCGAGCGTGACCTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MQNDFDRVFVLTGGPGSGKTTLIAALRRAGFATSVVAGRGIVRDQSSIGGTALPWSDRTLFAELMLSWEMRSYQNAVEQK GPVFFDRGVPETLGYLRLSGLPVADHVSTAAKRFRYNPRVFIAPPWPDIFAQDEERKQTPDEAKCTYHALAEIYTELGYE LVPLPLAPVETRLRFVLADAGLN
Sequences:
>Translated_183_residues MQNDFDRVFVLTGGPGSGKTTLIAALRRAGFATSVVAGRGIVRDQSSIGGTALPWSDRTLFAELMLSWEMRSYQNAVEQK GPVFFDRGVPETLGYLRLSGLPVADHVSTAAKRFRYNPRVFIAPPWPDIFAQDEERKQTPDEAKCTYHALAEIYTELGYE LVPLPLAPVETRLRFVLADAGLN >Mature_183_residues MQNDFDRVFVLTGGPGSGKTTLIAALRRAGFATSVVAGRGIVRDQSSIGGTALPWSDRTLFAELMLSWEMRSYQNAVEQK GPVFFDRGVPETLGYLRLSGLPVADHVSTAAKRFRYNPRVFIAPPWPDIFAQDEERKQTPDEAKCTYHALAEIYTELGYE LVPLPLAPVETRLRFVLADAGLN
Specific function: Unknown
COG id: COG3911
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20261; Mature: 20261
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNDFDRVFVLTGGPGSGKTTLIAALRRAGFATSVVAGRGIVRDQSSIGGTALPWSDRTL CCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHH FAELMLSWEMRSYQNAVEQKGPVFFDRGVPETLGYLRLSGLPVADHVSTAAKRFRYNPRV HHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHEECCCCCHHHHHHHHHHHCCCCEE FIAPPWPDIFAQDEERKQTPDEAKCTYHALAEIYTELGYELVPLPLAPVETRLRFVLADA EEECCCCHHHCCCHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHEEEEECC GLN CCC >Mature Secondary Structure MQNDFDRVFVLTGGPGSGKTTLIAALRRAGFATSVVAGRGIVRDQSSIGGTALPWSDRTL CCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHH FAELMLSWEMRSYQNAVEQKGPVFFDRGVPETLGYLRLSGLPVADHVSTAAKRFRYNPRV HHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHEECCCCCHHHHHHHHHHHCCCCEE FIAPPWPDIFAQDEERKQTPDEAKCTYHALAEIYTELGYELVPLPLAPVETRLRFVLADA EEECCCCHHHCCCHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHEEEEECC GLN CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA