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The map label for this gene is tdcF [C]

Identifier: 13471352

GI number: 13471352

Start: 1094289

End: 1094672

Strand: Direct

Name: tdcF [C]

Synonym: mlr1297

Alternate gene names: 13471352

Gene position: 1094289-1094672 (Clockwise)

Preceding gene: 13471340

Following gene: 13471353

Centisome position: 15.55

GC content: 65.89

Gene sequence:

>384_bases
ATGTTCAGATTCCTCACCCCGAAATCGATCAAGCCGCCCTTTGCCCGCTACAGCCACGGCGTCGAAGTGCCGGCGGGCAA
GCGGCTGGTGCTGTGCTCGGGCCAGGTGGCGATCACGGCGGACGACCAGATTCCCGAGGACGCCGGCGCCCAGGCCGAAC
TCTGCTTCCGCAACATCGAGGCAATCCTCGGCGAGGCCGGGCTGGGGCTCGCGGACATCGTGCGCATCAACGCCTACGTC
ACCGACCGCGCCCATTTGCGCCCCTATATGGATGTCCGCGACAGGCTGTTTTCGAGCCCTGCGCCGGCCTCGACGCTGAT
GATCGTTTCCGGCTTTGCTCGCGCCGAATTCAAGGTCGAGGTCGAAGCCATCGCGGCCGGGTGA

Upstream 100 bases:

>100_bases
ATTTTTTGAACGCCTGTCCACAATCGCACCGGCAACATGCACCACCATCTTGAAGCTGTGATGCGTCCCGCCTTAGGCTG
ACGGCATCCAGGAGATTGCC

Downstream 100 bases:

>100_bases
TCGACAGCAGGCCTGTGCCGCGCTAGGTCTCACCGTTCATCGAAGAGGCATGACATGACCGCTGCAAGAAGACGCGTCTG
GTGGGGCGACTACCGGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: Translation Initiation Inhibitor Protein; MRNA Endoribonuclease; Endoribonuclease L-PSP Superfamily; Endoribonuclease L-PSP Family Protein; Threonine Degradation Protein; L-PSP Family Endoribonuclease; Endoribonuclease

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MFRFLTPKSIKPPFARYSHGVEVPAGKRLVLCSGQVAITADDQIPEDAGAQAELCFRNIEAILGEAGLGLADIVRINAYV
TDRAHLRPYMDVRDRLFSSPAPASTLMIVSGFARAEFKVEVEAIAAG

Sequences:

>Translated_127_residues
MFRFLTPKSIKPPFARYSHGVEVPAGKRLVLCSGQVAITADDQIPEDAGAQAELCFRNIEAILGEAGLGLADIVRINAYV
TDRAHLRPYMDVRDRLFSSPAPASTLMIVSGFARAEFKVEVEAIAAG
>Mature_127_residues
MFRFLTPKSIKPPFARYSHGVEVPAGKRLVLCSGQVAITADDQIPEDAGAQAELCFRNIEAILGEAGLGLADIVRINAYV
TDRAHLRPYMDVRDRLFSSPAPASTLMIVSGFARAEFKVEVEAIAAG

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13734; Mature: 13734

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRFLTPKSIKPPFARYSHGVEVPAGKRLVLCSGQVAITADDQIPEDAGAQAELCFRNIE
CCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHH
AILGEAGLGLADIVRINAYVTDRAHLRPYMDVRDRLFSSPAPASTLMIVSGFARAEFKVE
HHHCCCCCCHHHHEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEE
VEAIAAG
EEEEECC
>Mature Secondary Structure
MFRFLTPKSIKPPFARYSHGVEVPAGKRLVLCSGQVAITADDQIPEDAGAQAELCFRNIE
CCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHH
AILGEAGLGLADIVRINAYVTDRAHLRPYMDVRDRLFSSPAPASTLMIVSGFARAEFKVE
HHHCCCCCCHHHHEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEE
VEAIAAG
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA