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The map label for this gene is 13471333

Identifier: 13471333

GI number: 13471333

Start: 1075441

End: 1076028

Strand: Direct

Name: 13471333

Synonym: mlr1276

Alternate gene names: NA

Gene position: 1075441-1076028 (Clockwise)

Preceding gene: 13471332

Following gene: 13471334

Centisome position: 15.28

GC content: 66.84

Gene sequence:

>588_bases
ATGGTTGAGCGCCAATCCCCCCTCGAGCCGGAGTTTCATGTCGGCTCGCATGGCAATTTCGAGCATGGCGTCGAGATCCT
GCTGACCGAGACAAGGCCGGGCTCGATCGTGCAGCTCGCCGCCTGGCCGGGCGAGGAGAAGAACCTGATCGCGACCATCC
GCACCGTCACCGGGCTGACGCTGCCCGACGGCGCAGGCGGGGGCTCGAGCGACGGCGTGAAATCGGTGTTCGGCTTCGCG
CCTGGAAAATTCACAGTGGCCGATGAGGCAGAAGGGCTGGCCGCTGCCTTCGCCAAGGCGGTGACGCCGGCCCTCGGCAC
GGTGACGGACCTGTCGCATGGCCGCACCGCCATCCGCATCGCCGGGCCGAAGGCCGAATGGGTGCTGGCGAAATTCTTCG
CCATCGACTTCGCGCTGCCGGCCTTCCCGGTCGGCGCCGGCCGCTCGACCGCCCATCACGATGTCTTCGCCCAGATTCAG
CGCACCGGCGCCGACCAGTTCGACATCTATGTCTTCCGCTCCTTCGCGCGCTCATTCTGGAAGGCGCTCTGCCATGCCAG
CGAGGAAGTCGGCTACGAGGTGCAGTAG

Upstream 100 bases:

>100_bases
CACGGCACGCGTGCCCATGTCTCCGATCCCTTGCGCAACAGGTTCGGACCGGTCGAGATCGTCTCCAACCATTTCTACGA
TCCGGAAGGGACCCGCATGC

Downstream 100 bases:

>100_bases
GCGGCGCGACGTCGCTTCTGGCCTCAATGCCGGCCGGTTCTGCCGCTAGAGAATCGCGCCGCCGGCGGCCATGGTGGAAA
AACGTGGCCGCCAGATCGGC

Product: sarcosine oxidase gamma subunit

Products: glycine; formaldehyde; H2O2

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MVERQSPLEPEFHVGSHGNFEHGVEILLTETRPGSIVQLAAWPGEEKNLIATIRTVTGLTLPDGAGGGSSDGVKSVFGFA
PGKFTVADEAEGLAAAFAKAVTPALGTVTDLSHGRTAIRIAGPKAEWVLAKFFAIDFALPAFPVGAGRSTAHHDVFAQIQ
RTGADQFDIYVFRSFARSFWKALCHASEEVGYEVQ

Sequences:

>Translated_195_residues
MVERQSPLEPEFHVGSHGNFEHGVEILLTETRPGSIVQLAAWPGEEKNLIATIRTVTGLTLPDGAGGGSSDGVKSVFGFA
PGKFTVADEAEGLAAAFAKAVTPALGTVTDLSHGRTAIRIAGPKAEWVLAKFFAIDFALPAFPVGAGRSTAHHDVFAQIQ
RTGADQFDIYVFRSFARSFWKALCHASEEVGYEVQ
>Mature_195_residues
MVERQSPLEPEFHVGSHGNFEHGVEILLTETRPGSIVQLAAWPGEEKNLIATIRTVTGLTLPDGAGGGSSDGVKSVFGFA
PGKFTVADEAEGLAAAFAKAVTPALGTVTDLSHGRTAIRIAGPKAEWVLAKFFAIDFALPAFPVGAGRSTAHHDVFAQIQ
RTGADQFDIYVFRSFARSFWKALCHASEEVGYEVQ

Specific function: Unknown

COG id: COG4583

COG function: function code E; Sarcosine oxidase gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.5.3.1

Molecular weight: Translated: 20770; Mature: 20770

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVERQSPLEPEFHVGSHGNFEHGVEILLTETRPGSIVQLAAWPGEEKNLIATIRTVTGLT
CCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEEEEHHHCCC
LPDGAGGGSSDGVKSVFGFAPGKFTVADEAEGLAAAFAKAVTPALGTVTDLSHGRTAIRI
CCCCCCCCCCCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCHHHCCCCCEEEEE
AGPKAEWVLAKFFAIDFALPAFPVGAGRSTAHHDVFAQIQRTGADQFDIYVFRSFARSFW
ECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
KALCHASEEVGYEVQ
HHHHHHHHHCCCCCC
>Mature Secondary Structure
MVERQSPLEPEFHVGSHGNFEHGVEILLTETRPGSIVQLAAWPGEEKNLIATIRTVTGLT
CCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEEEEHHHCCC
LPDGAGGGSSDGVKSVFGFAPGKFTVADEAEGLAAAFAKAVTPALGTVTDLSHGRTAIRI
CCCCCCCCCCCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCHHHCCCCCEEEEE
AGPKAEWVLAKFFAIDFALPAFPVGAGRSTAHHDVFAQIQRTGADQFDIYVFRSFARSFW
ECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
KALCHASEEVGYEVQ
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: sarcosine; H2O; O2

Specific reaction: sarcosine + H2O + O2 = glycine + formaldehyde + H2O2

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA