Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471176
Identifier: 13471176
GI number: 13471176
Start: 900392
End: 901282
Strand: Direct
Name: 13471176
Synonym: mlr1075
Alternate gene names: NA
Gene position: 900392-901282 (Clockwise)
Preceding gene: 13471174
Following gene: 13471182
Centisome position: 12.8
GC content: 61.39
Gene sequence:
>891_bases ATGAGTTTCTATGTTGTTGTCGGCGCAGGCCCGGTTGGACGCGAGACCGCGCGCCTTCTTGGTGAGGAAGGACATGATGT CGTCCTCACCAGCCGAAGCGTCGGTTCGAACGCGCTGCCGAACGTGCGGACCGTACAGGCCGATGCCACGGATGCCTCGG AACTGTCGCGTATCTGCCGGGGTGCCGATGCCATCTTCATGTGTGCCATGGCCGCATATCATCGGTGGCCGACCGACTTT TTCCCCATCATCGACGGCACCGTGCGCGCGGCCGAAGCGGTCGGCGCCAAGCTCATCGTGCTCGGAAACCTCTATGGTTA TGGAGAAAATGCCGATAGCCCGCTTCGCTCCGACCTGCCCCTGGACCCGACTTCGAGGAAGGGAACCGCCAGGACGATCA TGTGGCAGCGGGCGGTTCGAGCCGGCATACCGGCGATCGAAATACGCTCCAGCGACTATCTCGGACATGGGGCGATCAGC TACTTCTCACTGATCGCGCTGCCCGCCATCATCGAGGGCAAGCCTACCGCCTTCATCGGAGACCTCGACGCAACCCACGC CTGGGCCTTCACCAAGGACGTCGCGAGGACACTTGTCGCGGCGGCCCTTTACAAGGGTGAGTGGGGACGCGCGTTTCACG TTCCCTCGCAATACGCCTCACCCCGGGAGCTCATCCAGAAAGCCGCGGCGATGCTGGGACAAGAGGTTTCAGGGACACTT TCCTATTCCGTCCCCGAGATCGAAGCCTTGGGCATGCATGAGGCCATCGAGATGAGCTATCTATTCGAGAAACCTTTGCT GGTTGATGCCTCCGATACCGAGGCGCTTCTGGGCGTGAAGGCCAGCAGCCTCGAAGAGATGATCGCCGACACGCTCCGCG ATCATCTGTGA
Upstream 100 bases:
>100_bases TCATGGCGAAACCTGTTCAAGATTTGGCAATTCCCGCGCGATTTTCAATGCAGCGAAACTGTACGCACGCCTCTCCATCA AACTTGGAAGAGAGGTTGCC
Downstream 100 bases:
>100_bases ACCGTGCGGGCGGGCTTTGCAGCAACTGAAAAAGCCCGCTCCTTGCGGGGCGGGCCAAGCCGGCGGGCCGGACTGGAGGT CAGACGTCCCGCAAAAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NmrA-Like Protein/Nucleoside-Diphosphate-Sugar Epimerase; NmrA Family Protein; Short-Chain Dehydrogenase/Reductase SDR; NAD Dependent Epimerase; NAD Dependent Epimerase/Dehydratase Family; Saccharopine Dehydrogenase
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSFYVVVGAGPVGRETARLLGEEGHDVVLTSRSVGSNALPNVRTVQADATDASELSRICRGADAIFMCAMAAYHRWPTDF FPIIDGTVRAAEAVGAKLIVLGNLYGYGENADSPLRSDLPLDPTSRKGTARTIMWQRAVRAGIPAIEIRSSDYLGHGAIS YFSLIALPAIIEGKPTAFIGDLDATHAWAFTKDVARTLVAAALYKGEWGRAFHVPSQYASPRELIQKAAAMLGQEVSGTL SYSVPEIEALGMHEAIEMSYLFEKPLLVDASDTEALLGVKASSLEEMIADTLRDHL
Sequences:
>Translated_296_residues MSFYVVVGAGPVGRETARLLGEEGHDVVLTSRSVGSNALPNVRTVQADATDASELSRICRGADAIFMCAMAAYHRWPTDF FPIIDGTVRAAEAVGAKLIVLGNLYGYGENADSPLRSDLPLDPTSRKGTARTIMWQRAVRAGIPAIEIRSSDYLGHGAIS YFSLIALPAIIEGKPTAFIGDLDATHAWAFTKDVARTLVAAALYKGEWGRAFHVPSQYASPRELIQKAAAMLGQEVSGTL SYSVPEIEALGMHEAIEMSYLFEKPLLVDASDTEALLGVKASSLEEMIADTLRDHL >Mature_295_residues SFYVVVGAGPVGRETARLLGEEGHDVVLTSRSVGSNALPNVRTVQADATDASELSRICRGADAIFMCAMAAYHRWPTDFF PIIDGTVRAAEAVGAKLIVLGNLYGYGENADSPLRSDLPLDPTSRKGTARTIMWQRAVRAGIPAIEIRSSDYLGHGAISY FSLIALPAIIEGKPTAFIGDLDATHAWAFTKDVARTLVAAALYKGEWGRAFHVPSQYASPRELIQKAAAMLGQEVSGTLS YSVPEIEALGMHEAIEMSYLFEKPLLVDASDTEALLGVKASSLEEMIADTLRDHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31828; Mature: 31696
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFYVVVGAGPVGRETARLLGEEGHDVVLTSRSVGSNALPNVRTVQADATDASELSRICR CEEEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHC GADAIFMCAMAAYHRWPTDFFPIIDGTVRAAEAVGAKLIVLGNLYGYGENADSPLRSDLP CCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHCCEEEEEEECEECCCCCCCCCCCCCCC LDPTSRKGTARTIMWQRAVRAGIPAIEIRSSDYLGHGAISYFSLIALPAIIEGKPTAFIG CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEE DLDATHAWAFTKDVARTLVAAALYKGEWGRAFHVPSQYASPRELIQKAAAMLGQEVSGTL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHCCCHHHHHHHHHHHHCHHHCCEE SYSVPEIEALGMHEAIEMSYLFEKPLLVDASDTEALLGVKASSLEEMIADTLRDHL EECCCCHHHHCHHHHHHHHHHHCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SFYVVVGAGPVGRETARLLGEEGHDVVLTSRSVGSNALPNVRTVQADATDASELSRICR EEEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHC GADAIFMCAMAAYHRWPTDFFPIIDGTVRAAEAVGAKLIVLGNLYGYGENADSPLRSDLP CCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHCCEEEEEEECEECCCCCCCCCCCCCCC LDPTSRKGTARTIMWQRAVRAGIPAIEIRSSDYLGHGAISYFSLIALPAIIEGKPTAFIG CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEE DLDATHAWAFTKDVARTLVAAALYKGEWGRAFHVPSQYASPRELIQKAAAMLGQEVSGTL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHCCCHHHHHHHHHHHHCHHHCCEE SYSVPEIEALGMHEAIEMSYLFEKPLLVDASDTEALLGVKASSLEEMIADTLRDHL EECCCCHHHHCHHHHHHHHHHHCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA