Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471174
Identifier: 13471174
GI number: 13471174
Start: 898538
End: 899428
Strand: Direct
Name: 13471174
Synonym: mlr1073
Alternate gene names: NA
Gene position: 898538-899428 (Clockwise)
Preceding gene: 13471167
Following gene: 13471176
Centisome position: 12.77
GC content: 64.2
Gene sequence:
>891_bases ATGACCGACAGCACCATCGACGCCCTCAACAAGAAACTTGACCGCCTGATCGAGGCTGTCGGCCGCCTCGCCCCGCCGCC GGTGCCTGAAACCGACCTCGCCGAGGCCGACTGTTTCGTCTGGCAGGCGGATCCCGGCTATCTGGAGCCGGTGCGCAAGG TCAACCGCGTCGACATCGGCCTGATCCGCGGCGTCGACCGCGTCCGCGACATCCTCGTCGACAATACCGAGCGCTTCGCC GCCGGCTTTGCCGCCAACAACGTGCTGTTGTGGGGCGCGCGCGGCATGGGCAAATCGTCGCTGGTCAAGGCCGTGCATGC CGAGATCAATGCCAAGTCCAAATCACAAAAGGCCAAGTCCGACCTGCCGCTCAAGCTGATCGAGATCCACCGTGAAGACA TCGACACGCTGCCGAAGCTGATGGGTCTGCTGAAGGCCGCGCCCTTCCGCGTCATCCTGTTTTGCGACGACCTGTCCTTC GATCATGACGACACGTCCTACAAGTCGCTGAAGGCGGCACTCGAAGGCGGCGTCGAGGGCCGTCCGGCCAATGTCATCTT CTACGCCACCTCGAACCGCCGCCATTTGCTGCCGCGCGACATGATCGACAATGAGCGCTCGACCGCCATCAACCCGTCCG AAGCGGTCGAGGAGAAGGTCTCGTTGTCCGACCGGTTCGGCCTGTGGCTCGGCTTCCACAAATGTTCGCAGGACGAGTAT CTCGAGATGGTCAACGCCTATGCCAGCCATCATGGCCTCGACATCGACCCCGAGCAGCTGCGCGCGGAAGCGCTGGAATG GGCGACGACGCGCGGCAGCCGCTCGGGCCGCGTCGCCTGGCAGTTCACGCAGGATCTGGCCGGGCGGCTTGGCAAGCCGC TCAAGGATTGA
Upstream 100 bases:
>100_bases AAAGATCACGCTCGAACAAAAGGTTGGGACCGGTTTCGAACCCGACGGATTCGAACGTGTCCCACCTGCCCGCCCCAGGA AACGAGCCAAAAGACCTGAA
Downstream 100 bases:
>100_bases GCCACCGCCAAAGCAAACTTCAGGATGTCACTTGGGCGGCCGCGCCCGTCGTACGTCGCGCGGCGTTTGGCCAATCTCGC GGCGCATCCAATGCGCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; Intermediate Filament Protein; AAA+ Superfamily ATPase; AAA ATPase Superfamily
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTDSTIDALNKKLDRLIEAVGRLAPPPVPETDLAEADCFVWQADPGYLEPVRKVNRVDIGLIRGVDRVRDILVDNTERFA AGFAANNVLLWGARGMGKSSLVKAVHAEINAKSKSQKAKSDLPLKLIEIHREDIDTLPKLMGLLKAAPFRVILFCDDLSF DHDDTSYKSLKAALEGGVEGRPANVIFYATSNRRHLLPRDMIDNERSTAINPSEAVEEKVSLSDRFGLWLGFHKCSQDEY LEMVNAYASHHGLDIDPEQLRAEALEWATTRGSRSGRVAWQFTQDLAGRLGKPLKD
Sequences:
>Translated_296_residues MTDSTIDALNKKLDRLIEAVGRLAPPPVPETDLAEADCFVWQADPGYLEPVRKVNRVDIGLIRGVDRVRDILVDNTERFA AGFAANNVLLWGARGMGKSSLVKAVHAEINAKSKSQKAKSDLPLKLIEIHREDIDTLPKLMGLLKAAPFRVILFCDDLSF DHDDTSYKSLKAALEGGVEGRPANVIFYATSNRRHLLPRDMIDNERSTAINPSEAVEEKVSLSDRFGLWLGFHKCSQDEY LEMVNAYASHHGLDIDPEQLRAEALEWATTRGSRSGRVAWQFTQDLAGRLGKPLKD >Mature_295_residues TDSTIDALNKKLDRLIEAVGRLAPPPVPETDLAEADCFVWQADPGYLEPVRKVNRVDIGLIRGVDRVRDILVDNTERFAA GFAANNVLLWGARGMGKSSLVKAVHAEINAKSKSQKAKSDLPLKLIEIHREDIDTLPKLMGLLKAAPFRVILFCDDLSFD HDDTSYKSLKAALEGGVEGRPANVIFYATSNRRHLLPRDMIDNERSTAINPSEAVEEKVSLSDRFGLWLGFHKCSQDEYL EMVNAYASHHGLDIDPEQLRAEALEWATTRGSRSGRVAWQFTQDLAGRLGKPLKD
Specific function: Unknown
COG id: COG2607
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32946; Mature: 32815
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSTIDALNKKLDRLIEAVGRLAPPPVPETDLAEADCFVWQADPGYLEPVRKVNRVDIG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH LIRGVDRVRDILVDNTERFAAGFAANNVLLWGARGMGKSSLVKAVHAEINAKSKSQKAKS HHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHC DLPLKLIEIHREDIDTLPKLMGLLKAAPFRVILFCDDLSFDHDDTSYKSLKAALEGGVEG CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCC RPANVIFYATSNRRHLLPRDMIDNERSTAINPSEAVEEKVSLSDRFGLWLGFHKCSQDEY CCCEEEEEEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LEMVNAYASHHGLDIDPEQLRAEALEWATTRGSRSGRVAWQFTQDLAGRLGKPLKD HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCCCCCC >Mature Secondary Structure TDSTIDALNKKLDRLIEAVGRLAPPPVPETDLAEADCFVWQADPGYLEPVRKVNRVDIG CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH LIRGVDRVRDILVDNTERFAAGFAANNVLLWGARGMGKSSLVKAVHAEINAKSKSQKAKS HHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHC DLPLKLIEIHREDIDTLPKLMGLLKAAPFRVILFCDDLSFDHDDTSYKSLKAALEGGVEG CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCC RPANVIFYATSNRRHLLPRDMIDNERSTAINPSEAVEEKVSLSDRFGLWLGFHKCSQDEY CCCEEEEEEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH LEMVNAYASHHGLDIDPEQLRAEALEWATTRGSRSGRVAWQFTQDLAGRLGKPLKD HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA