| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13471169
Identifier: 13471169
GI number: 13471169
Start: 893524
End: 894000
Strand: Reverse
Name: 13471169
Synonym: mll1067
Alternate gene names: NA
Gene position: 894000-893524 (Counterclockwise)
Preceding gene: 13471170
Following gene: 13471168
Centisome position: 12.71
GC content: 63.31
Gene sequence:
>477_bases GTGCCGGGAACTGTCGCCAGAGATGACAGGCCGGCCCGGAGGGAATCCATGAGCTTGCCCGTTCTGGTCGCGATCGTCGT CCTTGGCATAGCGCTGTCGGTTGCCGCGGTGCATTTCACCGGCGGCAGCAAGACGGCCACGCTGGCCGATCCCGATCAGG CGTTGCGCCGTTTCGCCGAGGATTTTCCGGATGAAGTGGCGACAGCGATCCGCCTGACGGCGAACGCCAAAACGGCATTC CTGGACCTTGGACGAGGGCGAACCGGCATCGTTCACAGCATTGGCGACTGCTTTTTGACGCGTATCGTCACGGCTGCGGA CGTCTCGGTGTCCAGTTCCGACGAGGCGAACACAATTCTGATGCGGTTGACCGACTTCACCTGGAAGGGCGGCCGCTTCC ACTTGGCCAATGCCGGCGATGCGCAGGCCTTGCTGAAGGCTCTTGAAGCACGCCATGCCGCCAAGGAGGCCGCGTGA
Upstream 100 bases:
>100_bases CGGCTGTCGGCCTTGCGCCGGCACTGGCTGCTGGTGCGGCGGGCAAGCAAGGGCTGGCCGGCACTTTGACGTAAACGTCA ATCGTGCTAAGGATTCGGCC
Downstream 100 bases:
>100_bases TGGACAGCTATGATTTTCCGCAGGTCACCCAGCTGGCCATTCCGTTCTTCGTCGCCGCCATCCTGATCGAGCTCTGGCTT GTGCGCACCGGCCGCGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MPGTVARDDRPARRESMSLPVLVAIVVLGIALSVAAVHFTGGSKTATLADPDQALRRFAEDFPDEVATAIRLTANAKTAF LDLGRGRTGIVHSIGDCFLTRIVTAADVSVSSSDEANTILMRLTDFTWKGGRFHLANAGDAQALLKALEARHAAKEAA
Sequences:
>Translated_158_residues MPGTVARDDRPARRESMSLPVLVAIVVLGIALSVAAVHFTGGSKTATLADPDQALRRFAEDFPDEVATAIRLTANAKTAF LDLGRGRTGIVHSIGDCFLTRIVTAADVSVSSSDEANTILMRLTDFTWKGGRFHLANAGDAQALLKALEARHAAKEAA >Mature_157_residues PGTVARDDRPARRESMSLPVLVAIVVLGIALSVAAVHFTGGSKTATLADPDQALRRFAEDFPDEVATAIRLTANAKTAFL DLGRGRTGIVHSIGDCFLTRIVTAADVSVSSSDEANTILMRLTDFTWKGGRFHLANAGDAQALLKALEARHAAKEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16699; Mature: 16568
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGTVARDDRPARRESMSLPVLVAIVVLGIALSVAAVHFTGGSKTATLADPDQALRRFAE CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEECCHHHHHHHHHH DFPDEVATAIRLTANAKTAFLDLGRGRTGIVHSIGDCFLTRIVTAADVSVSSSDEANTIL HCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEE MRLTDFTWKGGRFHLANAGDAQALLKALEARHAAKEAA EEEECCEECCCEEEECCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PGTVARDDRPARRESMSLPVLVAIVVLGIALSVAAVHFTGGSKTATLADPDQALRRFAE CCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCEEEECCHHHHHHHHHH DFPDEVATAIRLTANAKTAFLDLGRGRTGIVHSIGDCFLTRIVTAADVSVSSSDEANTIL HCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEE MRLTDFTWKGGRFHLANAGDAQALLKALEARHAAKEAA EEEECCEECCCEEEECCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA