| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471091
Identifier: 13471091
GI number: 13471091
Start: 797667
End: 798098
Strand: Reverse
Name: 13471091
Synonym: mll0975
Alternate gene names: NA
Gene position: 798098-797667 (Counterclockwise)
Preceding gene: 13471092
Following gene: 13471086
Centisome position: 11.34
GC content: 56.94
Gene sequence:
>432_bases ATGAGCGACGAGTACAATCTGCATAGGTTCGTCCGCGCCCAAGCGCCGGTTTATGAGGCGACCATCGATGGCCTGCGTCG CGGGACGATGAATACTTCCCACATGGAGTTCATATTTCCGAGACTGGCATCCAGAAAACCCGCTCCCGCCTTGGAACCTT ACGCAATCAGGTCGCTCGATGAGGCAAGTGCTTACCTCGCCTGGCCGATCCTTGGAGGTCGGTATCGGGAGTGCGTCGAC ACCCTACATGGGCTCTTCCATCTACGCCCGCGTGTCGTCTTCGGTGAAATTGCCGCACGAAAGCTCCACGCATCACTGAC GCTGTTTTCCGAGGCAAGCGATAACGAGTTCCTGCTCGAGACCATGTTCGACGCCTGGTTCGATGGCATGCTCGACGAGG AGACCATGAGCCAGATTGCGATGATGCGATAA
Upstream 100 bases:
>100_bases AACCATCGAAGTCGAGAGCTCGTTCGGGTCTGGCACTACGGTGATATTGCGGCTCCCTGCCGAAGACCTTTGCTGTCCGG AAAAATCGGCGCGCTGACGC
Downstream 100 bases:
>100_bases CCATCCGGCTTTGCTATTGGTCGAGGCACGCCTCAAGCGTAGTTTCTTCAGGCTTAGTGCACTCGCTAAGTTCGAGCGCT TCAGTCGCCAGTCCCTTCGA
Product: calpastatin
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSDEYNLHRFVRAQAPVYEATIDGLRRGTMNTSHMEFIFPRLASRKPAPALEPYAIRSLDEASAYLAWPILGGRYRECVD TLHGLFHLRPRVVFGEIAARKLHASLTLFSEASDNEFLLETMFDAWFDGMLDEETMSQIAMMR
Sequences:
>Translated_143_residues MSDEYNLHRFVRAQAPVYEATIDGLRRGTMNTSHMEFIFPRLASRKPAPALEPYAIRSLDEASAYLAWPILGGRYRECVD TLHGLFHLRPRVVFGEIAARKLHASLTLFSEASDNEFLLETMFDAWFDGMLDEETMSQIAMMR >Mature_142_residues SDEYNLHRFVRAQAPVYEATIDGLRRGTMNTSHMEFIFPRLASRKPAPALEPYAIRSLDEASAYLAWPILGGRYRECVDT LHGLFHLRPRVVFGEIAARKLHASLTLFSEASDNEFLLETMFDAWFDGMLDEETMSQIAMMR
Specific function: Unknown
COG id: COG5579
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16418; Mature: 16287
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEYNLHRFVRAQAPVYEATIDGLRRGTMNTSHMEFIFPRLASRKPAPALEPYAIRSLD CCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH EASAYLAWPILGGRYRECVDTLHGLFHLRPRVVFGEIAARKLHASLTLFSEASDNEFLLE HHHHEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHH TMFDAWFDGMLDEETMSQIAMMR HHHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure SDEYNLHRFVRAQAPVYEATIDGLRRGTMNTSHMEFIFPRLASRKPAPALEPYAIRSLD CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH EASAYLAWPILGGRYRECVDTLHGLFHLRPRVVFGEIAARKLHASLTLFSEASDNEFLLE HHHHEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHH TMFDAWFDGMLDEETMSQIAMMR HHHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA