| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471086
Identifier: 13471086
GI number: 13471086
Start: 791850
End: 792407
Strand: Reverse
Name: 13471086
Synonym: mll0969
Alternate gene names: NA
Gene position: 792407-791850 (Counterclockwise)
Preceding gene: 13471091
Following gene: 13471085
Centisome position: 11.26
GC content: 61.11
Gene sequence:
>558_bases ATGATGAGCAACGTTATGACGATTGGTCTGGATATCGCGAAGTCCGTGTTTCAAATCCATGGCGTGCATGCGGCGGGCGA GGTTGTCGTTCGCAGGAAGCTGACCCGCGGGCGCGTGCTAGGGTTCTTCGAGAGGCTACCAAGATGCCTGGTCGGGATCG AGGCCTGCAGCTCCTCGCACTATTGGGCTCGCGAGCTCATCGCGCGAGGCCACGATGTTCGGCTGCTGCCGGCACAATAT GTGAAGCCCTATTTGAAGCGTCAGAAGAATGATGCGGCCGATGCAGAGGCCATTTGCGAGGCGGTGACCCGACCGACCAT GCGCTTCGTTCCGGTAAAGTCGCCCGAGCAGCAAAGCGTGATGATGCTGCACCGGGTGCGGTTAATGCTCAACCGCCCCC GGGGTCGGTCCGCTGCTGGCGAGCGCGTTCATAGCGACCGTCGCCGATCCGCATGCGTTCAAGTCGGGACGCTGTCTATC GGCCTGGATCGGGCTCGTTCCAAAGCAGAACTCGAGCGGAGGCAAGGAGAGGCTCGGCAGCATCTCCAAGGCTGGTAA
Upstream 100 bases:
>100_bases GGAATTTCGCGCCTGGAACCTGCCTGTCAGCTTTTGATGCGGTGGACGGCTCTCCTCCCTCCCTGCGGTATGTTCGCGGG ATCAGAGATGGAGGAGCGCT
Downstream 100 bases:
>100_bases TCGCTACCTGCGACAGCTGCTCGTGGTCGGTTCTATGGCGGTCATCCGCTATGCCGAGCGGAACGGAACCAGGAGGACAT GGCTTATGCAGTTGATGGCG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MMSNVMTIGLDIAKSVFQIHGVHAAGEVVVRRKLTRGRVLGFFERLPRCLVGIEACSSSHYWARELIARGHDVRLLPAQY VKPYLKRQKNDAADAEAICEAVTRPTMRFVPVKSPEQQSVMMLHRVRLMLNRPRGRSAAGERVHSDRRRSACVQVGTLSI GLDRARSKAELERRQGEARQHLQGW
Sequences:
>Translated_185_residues MMSNVMTIGLDIAKSVFQIHGVHAAGEVVVRRKLTRGRVLGFFERLPRCLVGIEACSSSHYWARELIARGHDVRLLPAQY VKPYLKRQKNDAADAEAICEAVTRPTMRFVPVKSPEQQSVMMLHRVRLMLNRPRGRSAAGERVHSDRRRSACVQVGTLSI GLDRARSKAELERRQGEARQHLQGW >Mature_185_residues MMSNVMTIGLDIAKSVFQIHGVHAAGEVVVRRKLTRGRVLGFFERLPRCLVGIEACSSSHYWARELIARGHDVRLLPAQY VKPYLKRQKNDAADAEAICEAVTRPTMRFVPVKSPEQQSVMMLHRVRLMLNRPRGRSAAGERVHSDRRRSACVQVGTLSI GLDRARSKAELERRQGEARQHLQGW
Specific function: Required for the transposition of an insertion element (Potential) [H]
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 20 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003583 - InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 20963; Mature: 20963
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSNVMTIGLDIAKSVFQIHGVHAAGEVVVRRKLTRGRVLGFFERLPRCLVGIEACSSSH CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YWARELIARGHDVRLLPAQYVKPYLKRQKNDAADAEAICEAVTRPTMRFVPVKSPEQQSV HHHHHHHHCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHH MMLHRVRLMLNRPRGRSAAGERVHSDRRRSACVQVGTLSIGLDRARSKAELERRQGEARQ HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLQGW HHCCC >Mature Secondary Structure MMSNVMTIGLDIAKSVFQIHGVHAAGEVVVRRKLTRGRVLGFFERLPRCLVGIEACSSSH CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YWARELIARGHDVRLLPAQYVKPYLKRQKNDAADAEAICEAVTRPTMRFVPVKSPEQQSV HHHHHHHHCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHH MMLHRVRLMLNRPRGRSAAGERVHSDRRRSACVQVGTLSIGLDRARSKAELERRQGEARQ HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLQGW HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]