Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471071
Identifier: 13471071
GI number: 13471071
Start: 762284
End: 763510
Strand: Reverse
Name: 13471071
Synonym: mll0948
Alternate gene names: NA
Gene position: 763510-762284 (Counterclockwise)
Preceding gene: 13471072
Following gene: 13471070
Centisome position: 10.85
GC content: 61.78
Gene sequence:
>1227_bases ATGGCTTTCAATCGCTTCACCCGAATTCGGCTCGTTGCGACCGGTATCCGCCGGAGTACAAGGGCAAATGTTGCCACCAT CTTCGCCCTCAGCCTGCCGATCGTCGTCGGCGCGGCCGGCTTCGGTGTGGAGACCTCCTACTGGTACTACAACAGCCTGA GACTGCAGGCGACGGCCGATGCCGCGGCCTATGCCGGCGCGCTTGAACAGATCTCGGGTTCCGACAAGCCGACGATAATC GCGGCGGCGACGCAGTCGGCAGCGACGAACGGGCTGGGCTCGGGCACGATCGTCGTCAACACGCCGCCAGCGTCCGGGCC GAATACAGCGAAGAAAGCGGTCGAGGTCATCGTCGCTCAGAACATCAACCGGATGTTCACCTCGATCTTCACGCAAGGTC AGGTGCCCGAGCAGGCGAGGGCGGTGGCCCTCATCACCAACGCTTCGAAGGCCTGCGTGCTCGCGCTCGACCCATCCGCT TCGCAGGCGGCGCTGTTTTCCGGCAACACCAGCGTCAAGCTCATCGGCTGCTCGGTCATGTCCAATTCGATCGCATCGGA CGCCATCAAGCTTCAGGGCTCGGCGGGCCTCCAGGCCGATTGCCTGATATCGGGGGGCGGTGTTTCTCTCAGCAATCCCG TTACGACCGTCTGCGCGGCCCCGATAACCCAGGCGCTGCCTGCCGCCGATCCATTTGCCGACCTGCCGGCCCCAGCCGCT TCGAACCCCTGCCAGAACGATAACAAAGCCACACTGAGTCCAGGCACCTATTGCAGCGGCATGACGCTAAAGGGCAATGT CACGCTCTCACCCGGCGTCTACGTCGTCCAGGGCAATCTCAAGATAAACGCCAACGCTGCCATCACAGGCAGCGGGGTGA CGATCTTCATGTCGGGCAGTTCGTCGGTCAGCATAAACGGCAACGCGTCCGTGAAGCTCAGCGCGCCGACTTCGGGCGCC TATTCAGGCGTTCTGTTCTATGGCGACAGAACCGGCAACAGCGCATCCAGCACCTTCAACGGCACAGCCGACTCGCTGCT GACTGGGGCCATCTACTTCCCGAAACAGCAGATCAGCTATCTCGGCAACTTCTCGGGCAACAACGGCTGCACCCAAGTCG TCGCCAATACGATCCAATGGTCTGGGAATTCAACCATCAATCAGGATTGCACGAGCCTCGGAATGCGAGACATTCCGGCC ACGCAGTCCGTGGCACTGGTCGAGTAG
Upstream 100 bases:
>100_bases TCAACAGCTGGTTATTTTGAAAGCCAATCGAAGCCGTCATCAAAAATGAACGGAACTTTTTAGCCGTTCCTTCATACATG CGTGCTTTCTAATTTAAGCT
Downstream 100 bases:
>100_bases GCTTCCATGGAACGCGGATCAATCCTTGGCGACCGTTCTGGCGTTGCCGCGGTCGAGTTCGCCATGGTCCTGCCCTTCCT GTGCGCGGCGCTGCTCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MAFNRFTRIRLVATGIRRSTRANVATIFALSLPIVVGAAGFGVETSYWYYNSLRLQATADAAAYAGALEQISGSDKPTII AAATQSAATNGLGSGTIVVNTPPASGPNTAKKAVEVIVAQNINRMFTSIFTQGQVPEQARAVALITNASKACVLALDPSA SQAALFSGNTSVKLIGCSVMSNSIASDAIKLQGSAGLQADCLISGGGVSLSNPVTTVCAAPITQALPAADPFADLPAPAA SNPCQNDNKATLSPGTYCSGMTLKGNVTLSPGVYVVQGNLKINANAAITGSGVTIFMSGSSSVSINGNASVKLSAPTSGA YSGVLFYGDRTGNSASSTFNGTADSLLTGAIYFPKQQISYLGNFSGNNGCTQVVANTIQWSGNSTINQDCTSLGMRDIPA TQSVALVE
Sequences:
>Translated_408_residues MAFNRFTRIRLVATGIRRSTRANVATIFALSLPIVVGAAGFGVETSYWYYNSLRLQATADAAAYAGALEQISGSDKPTII AAATQSAATNGLGSGTIVVNTPPASGPNTAKKAVEVIVAQNINRMFTSIFTQGQVPEQARAVALITNASKACVLALDPSA SQAALFSGNTSVKLIGCSVMSNSIASDAIKLQGSAGLQADCLISGGGVSLSNPVTTVCAAPITQALPAADPFADLPAPAA SNPCQNDNKATLSPGTYCSGMTLKGNVTLSPGVYVVQGNLKINANAAITGSGVTIFMSGSSSVSINGNASVKLSAPTSGA YSGVLFYGDRTGNSASSTFNGTADSLLTGAIYFPKQQISYLGNFSGNNGCTQVVANTIQWSGNSTINQDCTSLGMRDIPA TQSVALVE >Mature_407_residues AFNRFTRIRLVATGIRRSTRANVATIFALSLPIVVGAAGFGVETSYWYYNSLRLQATADAAAYAGALEQISGSDKPTIIA AATQSAATNGLGSGTIVVNTPPASGPNTAKKAVEVIVAQNINRMFTSIFTQGQVPEQARAVALITNASKACVLALDPSAS QAALFSGNTSVKLIGCSVMSNSIASDAIKLQGSAGLQADCLISGGGVSLSNPVTTVCAAPITQALPAADPFADLPAPAAS NPCQNDNKATLSPGTYCSGMTLKGNVTLSPGVYVVQGNLKINANAAITGSGVTIFMSGSSSVSINGNASVKLSAPTSGAY SGVLFYGDRTGNSASSTFNGTADSLLTGAIYFPKQQISYLGNFSGNNGCTQVVANTIQWSGNSTINQDCTSLGMRDIPAT QSVALVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41411; Mature: 41280
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFNRFTRIRLVATGIRRSTRANVATIFALSLPIVVGAAGFGVETSYWYYNSLRLQATAD CCCCCEEEEEEEEECCCCCCCCCEEEEEEEEHHHHEEECCCCCCEEEEEEEEEEEEEECC AAAYAGALEQISGSDKPTIIAAATQSAATNGLGSGTIVVNTPPASGPNTAKKAVEVIVAQ HHHHHHHHHHHCCCCCCEEEEEECCCHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH NINRMFTSIFTQGQVPEQARAVALITNASKACVLALDPSASQAALFSGNTSVKLIGCSVM HHHHHHHHHHCCCCCCHHHCEEEEEECCCCEEEEEECCCCCCEEEEECCCEEEEEEEEHH SNSIASDAIKLQGSAGLQADCLISGGGVSLSNPVTTVCAAPITQALPAADPFADLPAPAA HCCHHCCEEEEECCCCCEEEEEEECCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC SNPCQNDNKATLSPGTYCSGMTLKGNVTLSPGVYVVQGNLKINANAAITGSGVTIFMSGS CCCCCCCCCEEECCCCEECCEEEECCEEECCCEEEEECCEEEECCEEEECCCEEEEEECC SSVSINGNASVKLSAPTSGAYSGVLFYGDRTGNSASSTFNGTADSLLTGAIYFPKQQISY CEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHEEEEEECCHHHHHH LGNFSGNNGCTQVVANTIQWSGNSTINQDCTSLGMRDIPATQSVALVE HCCCCCCCCHHHHHHHHEEECCCCCCCHHHHHCCCCCCCCCCCEEEEC >Mature Secondary Structure AFNRFTRIRLVATGIRRSTRANVATIFALSLPIVVGAAGFGVETSYWYYNSLRLQATAD CCCCEEEEEEEEECCCCCCCCCEEEEEEEEHHHHEEECCCCCCEEEEEEEEEEEEEECC AAAYAGALEQISGSDKPTIIAAATQSAATNGLGSGTIVVNTPPASGPNTAKKAVEVIVAQ HHHHHHHHHHHCCCCCCEEEEEECCCHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH NINRMFTSIFTQGQVPEQARAVALITNASKACVLALDPSASQAALFSGNTSVKLIGCSVM HHHHHHHHHHCCCCCCHHHCEEEEEECCCCEEEEEECCCCCCEEEEECCCEEEEEEEEHH SNSIASDAIKLQGSAGLQADCLISGGGVSLSNPVTTVCAAPITQALPAADPFADLPAPAA HCCHHCCEEEEECCCCCEEEEEEECCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC SNPCQNDNKATLSPGTYCSGMTLKGNVTLSPGVYVVQGNLKINANAAITGSGVTIFMSGS CCCCCCCCCEEECCCCEECCEEEECCEEECCCEEEEECCEEEECCEEEECCCEEEEEECC SSVSINGNASVKLSAPTSGAYSGVLFYGDRTGNSASSTFNGTADSLLTGAIYFPKQQISY CEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHEEEEEECCHHHHHH LGNFSGNNGCTQVVANTIQWSGNSTINQDCTSLGMRDIPATQSVALVE HCCCCCCCCHHHHHHHHEEECCCCCCCHHHHHCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA