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The map label for this gene is recJ [H]

Identifier: 13471056

GI number: 13471056

Start: 747793

End: 749571

Strand: Reverse

Name: recJ [H]

Synonym: mll0927

Alternate gene names: 13471056

Gene position: 749571-747793 (Counterclockwise)

Preceding gene: 13471057

Following gene: 13471051

Centisome position: 10.65

GC content: 67.06

Gene sequence:

>1779_bases
ATGGGCGACAGGCGCCTCTTCCTCGATATCAGGCAGTCGGCGACCGGTCTCTCCTGGGAGCACCGGCTGACCGAACGGCA
GGACATGGTCGCGCTTGCCATCGCGCAGGGCCATGGCGTGCCCGACATCGTCGCGCGCGTTCTGGCCGGACGCGGGGTTA
CCGCCGACGAGACCGAGCGCTTCCTCGAGCCGACAATCCGCGACCTGTTGCCCAATCCGGCTTCGCTGACCGACATGGAC
AAGGCCGCCACCCGCATCGCCGCGGCGGTGATGGCGCGGGAAAAAGTGGCGATCTTCGGCGACTACGATGTCGACGGCGC
CGCCTCGTCGGCCTTGCTGAAACGGTTCCTGGCGCATTTCTCCATACCGTCGGAAATCTATATTCCGGACCGTATCTTCG
AGGGTTACGGTCCCAATCCCGATGCCATGCGCGAACTCGTCTCGCGCGGCGCGACGCTGATCGTCACCGTCGATTGCGGC
ACCAACAGTGCCATTTCCGTAGATGCCGCCAATGAAGCCGGCGCCGATGTCGTGGTGCTCGACCACCATCAGGTCGGCGG
CGCCTTGCCGGCGGCGATTGCCGTCGTCAATCCAAACCGTGACGACGATCTTTCGGGGCAGGGCCATCTCTGCGCCGCCG
GTGTCGTCTTTCTTGCCTTGGTGCAGACCGCGAAAATCCTGCGTGGCCTGAGCGATGTCGCGCCGCCCGACCTGCTGTCA
CTGCTCGATCTCGTTGCGTTGGCGACCGTTTGCGATGTGGTGCCGCTCACCGGCGTCAACCGCGCCTTCGTCGTCAAAGG
GCTGCAGATGGCGCGCCAGCAGAAGAATGAAGGCCTGGCCGCATTGGCGCGAGTGTCGCGCATTGGCGAACCGATCAGCA
CGTTCCATCTCGCCTATCTGATCGGGCCGCGCATCAACGCCGGCGGCCGCATCGGCGATGCAGCACTTGGCAGCCGGCTG
CTTGCGACGGACGATCCGGTCGAGGCGCGGACCATTGCCGAGACGCTCGACCGGCTGAACCAGGAGCGGCAGCTGATGGA
GCAGGAGATGCTGGCCGCGGCGCGTGCCGAGGCCGATGCCGAGCTTGCGGGCGGCAGCGGCCCGGCGATCGTCGTCACCG
CCAGCAACAATTGGCATCCCGGCATTGTCGGCCTGCTTGCCTCGAGGCTGAAGGATCATGCGCGCCGCCCGGCTTTCGCC
ATTGCCTTCAACGCCGTGGGCATCGGTACCGGTTCGGGCCGCTCGGTGTCGGGCTTCGATCTCGGCCGGCTGGTGCGCGA
AGCCGCCGACGCCGGGCTGATCGTCAAGGGTGGCGGTCATGGCATGGCGGCCGGCATCACCGTGGAGCGCGCCAGGCTGG
GCGAACTCAGGGCGTTCTTCGAGGAACGGGCGGCTGCCGACGTGTTTCGGCTGCAGGACGAGGAGAGCCTGGCGATCGAC
GGCGCGCTTGCCGCCGAAGGCGCGACGCTCAGCCTGCTCGACGCGCTGGAAAAGGCCGGCCCGTTTGGCGCCGGCCACGT
CGCGCCGGTCTTCGTGCTGCCGCGCCATCGGCTGGCCGACGCCCGGCCGGTCGGCACCAATCATATACGCTGCGAATTGC
AGTCGGACGCCGGCGGCCGCATCCCCGCGATCGCCTTTCGGGCCGTCGATACGGTGCTTGGCGAATTCCTGTTCAAGAAC
CGGGGCAAGAGCGTGCATGTCGCCGGCTCGCTGTCGGGCAATTACTGGAACGGCAACCGCACGGTGCAATTCCGTATCGT
CGATGCGGCGCGGTCGTAG

Upstream 100 bases:

>100_bases
TTTAAGTTGTTGTCTCCGCATGTCGCTGGCCCAAAACCGCTGCACACTTTTGCGCGATATGCACTATCCTGCTGCCAACA
ATGAATTGGCAGGGCGCATG

Downstream 100 bases:

>100_bases
CTGCGTCAGTATCTATGCAGCTTGGTTGGCCGGCGCATAACGCAGCAGCGTCACGCCCTGGGGCAGGCTTTCCGTGCCAA
GCGGTTTCAACGCCAGCGAC

Product: single-strand DNA-specific exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 592; Mature: 591

Protein sequence:

>592_residues
MGDRRLFLDIRQSATGLSWEHRLTERQDMVALAIAQGHGVPDIVARVLAGRGVTADETERFLEPTIRDLLPNPASLTDMD
KAATRIAAAVMAREKVAIFGDYDVDGAASSALLKRFLAHFSIPSEIYIPDRIFEGYGPNPDAMRELVSRGATLIVTVDCG
TNSAISVDAANEAGADVVVLDHHQVGGALPAAIAVVNPNRDDDLSGQGHLCAAGVVFLALVQTAKILRGLSDVAPPDLLS
LLDLVALATVCDVVPLTGVNRAFVVKGLQMARQQKNEGLAALARVSRIGEPISTFHLAYLIGPRINAGGRIGDAALGSRL
LATDDPVEARTIAETLDRLNQERQLMEQEMLAAARAEADAELAGGSGPAIVVTASNNWHPGIVGLLASRLKDHARRPAFA
IAFNAVGIGTGSGRSVSGFDLGRLVREAADAGLIVKGGGHGMAAGITVERARLGELRAFFEERAAADVFRLQDEESLAID
GALAAEGATLSLLDALEKAGPFGAGHVAPVFVLPRHRLADARPVGTNHIRCELQSDAGGRIPAIAFRAVDTVLGEFLFKN
RGKSVHVAGSLSGNYWNGNRTVQFRIVDAARS

Sequences:

>Translated_592_residues
MGDRRLFLDIRQSATGLSWEHRLTERQDMVALAIAQGHGVPDIVARVLAGRGVTADETERFLEPTIRDLLPNPASLTDMD
KAATRIAAAVMAREKVAIFGDYDVDGAASSALLKRFLAHFSIPSEIYIPDRIFEGYGPNPDAMRELVSRGATLIVTVDCG
TNSAISVDAANEAGADVVVLDHHQVGGALPAAIAVVNPNRDDDLSGQGHLCAAGVVFLALVQTAKILRGLSDVAPPDLLS
LLDLVALATVCDVVPLTGVNRAFVVKGLQMARQQKNEGLAALARVSRIGEPISTFHLAYLIGPRINAGGRIGDAALGSRL
LATDDPVEARTIAETLDRLNQERQLMEQEMLAAARAEADAELAGGSGPAIVVTASNNWHPGIVGLLASRLKDHARRPAFA
IAFNAVGIGTGSGRSVSGFDLGRLVREAADAGLIVKGGGHGMAAGITVERARLGELRAFFEERAAADVFRLQDEESLAID
GALAAEGATLSLLDALEKAGPFGAGHVAPVFVLPRHRLADARPVGTNHIRCELQSDAGGRIPAIAFRAVDTVLGEFLFKN
RGKSVHVAGSLSGNYWNGNRTVQFRIVDAARS
>Mature_591_residues
GDRRLFLDIRQSATGLSWEHRLTERQDMVALAIAQGHGVPDIVARVLAGRGVTADETERFLEPTIRDLLPNPASLTDMDK
AATRIAAAVMAREKVAIFGDYDVDGAASSALLKRFLAHFSIPSEIYIPDRIFEGYGPNPDAMRELVSRGATLIVTVDCGT
NSAISVDAANEAGADVVVLDHHQVGGALPAAIAVVNPNRDDDLSGQGHLCAAGVVFLALVQTAKILRGLSDVAPPDLLSL
LDLVALATVCDVVPLTGVNRAFVVKGLQMARQQKNEGLAALARVSRIGEPISTFHLAYLIGPRINAGGRIGDAALGSRLL
ATDDPVEARTIAETLDRLNQERQLMEQEMLAAARAEADAELAGGSGPAIVVTASNNWHPGIVGLLASRLKDHARRPAFAI
AFNAVGIGTGSGRSVSGFDLGRLVREAADAGLIVKGGGHGMAAGITVERARLGELRAFFEERAAADVFRLQDEESLAIDG
ALAAEGATLSLLDALEKAGPFGAGHVAPVFVLPRHRLADARPVGTNHIRCELQSDAGGRIPAIAFRAVDTVLGEFLFKNR
GKSVHVAGSLSGNYWNGNRTVQFRIVDAARS

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=565, Percent_Identity=35.7522123893805, Blast_Score=257, Evalue=1e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 62408; Mature: 62277

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDRRLFLDIRQSATGLSWEHRLTERQDMVALAIAQGHGVPDIVARVLAGRGVTADETER
CCCCEEEEEECCCCCCCCHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCCCHHHHHH
FLEPTIRDLLPNPASLTDMDKAATRIAAAVMAREKVAIFGDYDVDGAASSALLKRFLAHF
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHC
SIPSEIYIPDRIFEGYGPNPDAMRELVSRGATLIVTVDCGTNSAISVDAANEAGADVVVL
CCCCCEECCHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCEEEEE
DHHQVGGALPAAIAVVNPNRDDDLSGQGHLCAAGVVFLALVQTAKILRGLSDVAPPDLLS
ECHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LLDLVALATVCDVVPLTGVNRAFVVKGLQMARQQKNEGLAALARVSRIGEPISTFHLAYL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH
IGPRINAGGRIGDAALGSRLLATDDPVEARTIAETLDRLNQERQLMEQEMLAAARAEADA
CCCCCCCCCCCCHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ELAGGSGPAIVVTASNNWHPGIVGLLASRLKDHARRPAFAIAFNAVGIGTGSGRSVSGFD
HCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCHH
LGRLVREAADAGLIVKGGGHGMAAGITVERARLGELRAFFEERAAADVFRLQDEESLAID
HHHHHHHHHCCCEEEECCCCCEEECEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC
GALAAEGATLSLLDALEKAGPFGAGHVAPVFVLPRHRLADARPVGTNHIRCELQSDAGGR
CHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCHHCCCCCCCCCCEEEEEEECCCCCC
IPAIAFRAVDTVLGEFLFKNRGKSVHVAGSLSGNYWNGNRTVQFRIVDAARS
CHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEECCCEEEEEEEECCCCC
>Mature Secondary Structure 
GDRRLFLDIRQSATGLSWEHRLTERQDMVALAIAQGHGVPDIVARVLAGRGVTADETER
CCCEEEEEECCCCCCCCHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCCCHHHHHH
FLEPTIRDLLPNPASLTDMDKAATRIAAAVMAREKVAIFGDYDVDGAASSALLKRFLAHF
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHC
SIPSEIYIPDRIFEGYGPNPDAMRELVSRGATLIVTVDCGTNSAISVDAANEAGADVVVL
CCCCCEECCHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCEEEEE
DHHQVGGALPAAIAVVNPNRDDDLSGQGHLCAAGVVFLALVQTAKILRGLSDVAPPDLLS
ECHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LLDLVALATVCDVVPLTGVNRAFVVKGLQMARQQKNEGLAALARVSRIGEPISTFHLAYL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH
IGPRINAGGRIGDAALGSRLLATDDPVEARTIAETLDRLNQERQLMEQEMLAAARAEADA
CCCCCCCCCCCCHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ELAGGSGPAIVVTASNNWHPGIVGLLASRLKDHARRPAFAIAFNAVGIGTGSGRSVSGFD
HCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCHH
LGRLVREAADAGLIVKGGGHGMAAGITVERARLGELRAFFEERAAADVFRLQDEESLAID
HHHHHHHHHCCCEEEECCCCCEEECEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC
GALAAEGATLSLLDALEKAGPFGAGHVAPVFVLPRHRLADARPVGTNHIRCELQSDAGGR
CHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCHHCCCCCCCCCCEEEEEEECCCCCC
IPAIAFRAVDTVLGEFLFKNRGKSVHVAGSLSGNYWNGNRTVQFRIVDAARS
CHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEECCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]