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The map label for this gene is nifU [H]

Identifier: 13471051

GI number: 13471051

Start: 744101

End: 744547

Strand: Reverse

Name: nifU [H]

Synonym: mll0920

Alternate gene names: 13471051

Gene position: 744547-744101 (Counterclockwise)

Preceding gene: 13471056

Following gene: 13471049

Centisome position: 10.58

GC content: 63.31

Gene sequence:

>447_bases
ATGATCAACGATGTCTACAACGCGAAAATTCTCGGTTTTGCCGGAAACATCGCCCGCATCGGCCGGCTCGATCATCCGGA
CGCGACCGCCAAGGCGCATTCCAAGCTGTGCGGTTCGACCGTTACCGTCGATCTCAAGATGGAGGACGGCGTGGTCACCG
ACTTCGCCCATGACGTGAAGGCCTGCGCGCTCGGCCAGGCGTCGTCCTCGATCATGGCCCAGCATGTCGTCGGCGCGAGC
GCCGAGGAATTGCGCACGGTGCGCGACACCATGCTGAGGATGCTGAAGGAGAACGGCACGCCGCCGGAAGGGCGCTTCGC
CGACCTGAAGTACCTTGAGCCGGTGCGCGACTACAAGGCACGGCATGCCTCGACCATGCTGACCTTCGACGCCGTGGTCG
ACGCCATCGGCCAGATCGAGAAAAAGCGCGCCGAACAAGCGGCCTGA

Upstream 100 bases:

>100_bases
TCGTTACCGGACTGCCAGCATTATATAAGGTCGTAGCGAGCGAAAGGAAGACACAGCAGCGGCAATCGCTGTTCGCTTGG
CGGCGACGGATTGGAAAATA

Downstream 100 bases:

>100_bases
CCTTGCCATTTCCGCTTTTCACGATGCGCGGACTTCGCGGCGGCCCGCGACACCGGGTAAACGACATCGACAAGCTTCTC
GAAAAATACAAGAAGGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MINDVYNAKILGFAGNIARIGRLDHPDATAKAHSKLCGSTVTVDLKMEDGVVTDFAHDVKACALGQASSSIMAQHVVGAS
AEELRTVRDTMLRMLKENGTPPEGRFADLKYLEPVRDYKARHASTMLTFDAVVDAIGQIEKKRAEQAA

Sequences:

>Translated_148_residues
MINDVYNAKILGFAGNIARIGRLDHPDATAKAHSKLCGSTVTVDLKMEDGVVTDFAHDVKACALGQASSSIMAQHVVGAS
AEELRTVRDTMLRMLKENGTPPEGRFADLKYLEPVRDYKARHASTMLTFDAVVDAIGQIEKKRAEQAA
>Mature_148_residues
MINDVYNAKILGFAGNIARIGRLDHPDATAKAHSKLCGSTVTVDLKMEDGVVTDFAHDVKACALGQASSSIMAQHVVGAS
AEELRTVRDTMLRMLKENGTPPEGRFADLKYLEPVRDYKARHASTMLTFDAVVDAIGQIEKKRAEQAA

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 16044; Mature: 16044

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINDVYNAKILGFAGNIARIGRLDHPDATAKAHSKLCGSTVTVDLKMEDGVVTDFAHDVK
CCCCCCCCEEEECCCCHHHHCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHH
ACALGQASSSIMAQHVVGASAEELRTVRDTMLRMLKENGTPPEGRFADLKYLEPVRDYKA
HHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
RHASTMLTFDAVVDAIGQIEKKRAEQAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MINDVYNAKILGFAGNIARIGRLDHPDATAKAHSKLCGSTVTVDLKMEDGVVTDFAHDVK
CCCCCCCCEEEECCCCHHHHCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHH
ACALGQASSSIMAQHVVGASAEELRTVRDTMLRMLKENGTPPEGRFADLKYLEPVRDYKA
HHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
RHASTMLTFDAVVDAIGQIEKKRAEQAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]