Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470982
Identifier: 13470982
GI number: 13470982
Start: 662426
End: 663178
Strand: Reverse
Name: 13470982
Synonym: mll0832
Alternate gene names: NA
Gene position: 663178-662426 (Counterclockwise)
Preceding gene: 13470983
Following gene: 13470980
Centisome position: 9.43
GC content: 61.62
Gene sequence:
>753_bases ATGTCCGATGCTCCCAAGACCTCCGGCATGACCCGGCTGAGAAACTATTTCCTCACGGGCTTCGTCGTCTGTGCGCCGCT GGCGATCACCGCCTACATCGCCTGGTCGTTCATCGGCTGGGTCGATTCCTGGGTAAAGCCCTATATTCCGGCGCGTTACA GCCCCGACACCTATCTGCCGTTTCCGGTCCCGGGGTTCGGGCTGATCGTTGCGCTGATCCTGATCACGCTGATCGGGTTC CTCACCGCCAACATTGTCGGCCGCGCCATTGTCGGTTTTGGCGAGCGCCTGCTTGGCCGCATGCCGCTGGTGCGCGGCAT CTATGGCTCGCTGAAGCAGATTTTCGAGGCCGTGCTGTCGAACAAGGGCGACATGTTCCGCCAGGTCGGGCTGGTCGAAT ATCCGCGCAAGGGCGTGTGGTCGCTGGTGTTCGTCGCCAGCGAGAAGGAAACCGAGATCAATGAGAAGCTCGACCAGGAA GGCGATCCGCTGATCGCCGTGTTCATGCCCTGCACACCGAACCCGACGACCGGCTTCCTGATGTATGTGCTGAAGTCGGA CATCGTGCTGCTTGACATGACGATCGAGGACGGCGCCAAGCTGATTGTTTCTGCAGGGCTGGTGGCGCCGGAGGTGAAAA GCAAGATGGTGACGCTGAATGGCGAGCCGATCAACGGAACGGTCGCCAATCCGCCATTAGGGTCTCACCCGGCCCGCAGG AGCCGCACGGCCTCGTCGCGGCCGAACAGATAG
Upstream 100 bases:
>100_bases GTGGAATAGGGGGCCCTAACAGGCGCTCTTTAAAAACTTCGCAGTTCCAAACGGCGTCCCGGTTCACTAATGTTGCGCTG CAACCCGCGCCCGGTGAACC
Downstream 100 bases:
>100_bases AGCAGCAGGCGCAGCGCCTCGCCGCGGTCGGATTGCAGCTCCGGGTCGCGCGACAGGATAAGCCTGGCATCGTCGCGGGC GGCCTCCAGAAGATCGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MSDAPKTSGMTRLRNYFLTGFVVCAPLAITAYIAWSFIGWVDSWVKPYIPARYSPDTYLPFPVPGFGLIVALILITLIGF LTANIVGRAIVGFGERLLGRMPLVRGIYGSLKQIFEAVLSNKGDMFRQVGLVEYPRKGVWSLVFVASEKETEINEKLDQE GDPLIAVFMPCTPNPTTGFLMYVLKSDIVLLDMTIEDGAKLIVSAGLVAPEVKSKMVTLNGEPINGTVANPPLGSHPARR SRTASSRPNR
Sequences:
>Translated_250_residues MSDAPKTSGMTRLRNYFLTGFVVCAPLAITAYIAWSFIGWVDSWVKPYIPARYSPDTYLPFPVPGFGLIVALILITLIGF LTANIVGRAIVGFGERLLGRMPLVRGIYGSLKQIFEAVLSNKGDMFRQVGLVEYPRKGVWSLVFVASEKETEINEKLDQE GDPLIAVFMPCTPNPTTGFLMYVLKSDIVLLDMTIEDGAKLIVSAGLVAPEVKSKMVTLNGEPINGTVANPPLGSHPARR SRTASSRPNR >Mature_249_residues SDAPKTSGMTRLRNYFLTGFVVCAPLAITAYIAWSFIGWVDSWVKPYIPARYSPDTYLPFPVPGFGLIVALILITLIGFL TANIVGRAIVGFGERLLGRMPLVRGIYGSLKQIFEAVLSNKGDMFRQVGLVEYPRKGVWSLVFVASEKETEINEKLDQEG DPLIAVFMPCTPNPTTGFLMYVLKSDIVLLDMTIEDGAKLIVSAGLVAPEVKSKMVTLNGEPINGTVANPPLGSHPARRS RTASSRPNR
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27337; Mature: 27206
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAPKTSGMTRLRNYFLTGFVVCAPLAITAYIAWSFIGWVDSWVKPYIPARYSPDTYLP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC FPVPGFGLIVALILITLIGFLTANIVGRAIVGFGERLLGRMPLVRGIYGSLKQIFEAVLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NKGDMFRQVGLVEYPRKGVWSLVFVASEKETEINEKLDQEGDPLIAVFMPCTPNPTTGFL CCCHHHHHHCCHHCCCCCCEEEEEEECCCHHHHHHHHCCCCCCEEEEEECCCCCCCHHHH MYVLKSDIVLLDMTIEDGAKLIVSAGLVAPEVKSKMVTLNGEPINGTVANPPLGSHPARR HHHHHCCEEEEEEECCCCHHHHHHHCCCCCCHHCEEEEECCCCCCCCCCCCCCCCCCCHH SRTASSRPNR CCCCCCCCCC >Mature Secondary Structure SDAPKTSGMTRLRNYFLTGFVVCAPLAITAYIAWSFIGWVDSWVKPYIPARYSPDTYLP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC FPVPGFGLIVALILITLIGFLTANIVGRAIVGFGERLLGRMPLVRGIYGSLKQIFEAVLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NKGDMFRQVGLVEYPRKGVWSLVFVASEKETEINEKLDQEGDPLIAVFMPCTPNPTTGFL CCCHHHHHHCCHHCCCCCCEEEEEEECCCHHHHHHHHCCCCCCEEEEEECCCCCCCHHHH MYVLKSDIVLLDMTIEDGAKLIVSAGLVAPEVKSKMVTLNGEPINGTVANPPLGSHPARR HHHHHCCEEEEEEECCCCHHHHHHHCCCCCCHHCEEEEECCCCCCCCCCCCCCCCCCCHH SRTASSRPNR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA