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The map label for this gene is yohD [H]

Identifier: 13470974

GI number: 13470974

Start: 651790

End: 652377

Strand: Direct

Name: yohD [H]

Synonym: mlr0822

Alternate gene names: 13470974

Gene position: 651790-652377 (Clockwise)

Preceding gene: 13470973

Following gene: 13470977

Centisome position: 9.26

GC content: 63.78

Gene sequence:

>588_bases
ATGACCGAAGCGATCCATCATTTTATCGAACAGTATGGGCTGCTTGCCGTCTTTCTCGGCTGTGTCGCCGAAGGGGAAAG
TGCTGCCATTCTCGGCGGTTTCTTCGCCCACCAGCATGTTTTCGTGCTGTGGCATGCCATTGTCGCGGCGGCGCTCGGCG
CCTTCGTCGGCGACACCTGCTTCTTCATCCTGGGCAGAAGTTTCGCCGACAACCGTCAGGTCGTCAGGCTACGCAGGCGG
CCCGGCTTCCGCCGCGCCTACCGTCTGCTCAATACCCATCCCGACATCTTCGTGCTGTCGAACCGCTATGTCTATGGCAT
GCGCCTGGTCGGCGGCATCGCGGCCGGCCTGTCGACCATAGCAGCACCCCGCTTCGTCATCCTCAACGCCATCTCATCGG
TGATCTGGGCGGTGCTGTTCAGCACCATCGGTTATGTCTTCGGGCTGGGCGCCGAGCATTTCGTCGGCCAGGCGCTGATG
CGCCACGAGCGGCTGTTCATCGGGCTCGGCATCGGCCTGACGGTGGCCGCGCTGGCCTGGCTTGTCGCCCGCCACATCGC
CAAGCGGGAGCGTCGCCGGGAGCAGTGA

Upstream 100 bases:

>100_bases
TGCGCCACAGCCAGATCATCGGCATGCGCGACGAGATCGTGCGGCTGGCGGAAGCGGTCAAGAGCATCGACGAGAGGCTG
GCGCGGCAGCAGTCGGCCTC

Downstream 100 bases:

>100_bases
TGCCGCCGGCCTCGCTCGGAAGGTCAGATCGGAAAGCCGGTGATCCGTTCGATCAGCGCGATGCCCCAGACGCCGGCGAC
GATGACCACGGAGATCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTEAIHHFIEQYGLLAVFLGCVAEGESAAILGGFFAHQHVFVLWHAIVAAALGAFVGDTCFFILGRSFADNRQVVRLRRR
PGFRRAYRLLNTHPDIFVLSNRYVYGMRLVGGIAAGLSTIAAPRFVILNAISSVIWAVLFSTIGYVFGLGAEHFVGQALM
RHERLFIGLGIGLTVAALAWLVARHIAKRERRREQ

Sequences:

>Translated_195_residues
MTEAIHHFIEQYGLLAVFLGCVAEGESAAILGGFFAHQHVFVLWHAIVAAALGAFVGDTCFFILGRSFADNRQVVRLRRR
PGFRRAYRLLNTHPDIFVLSNRYVYGMRLVGGIAAGLSTIAAPRFVILNAISSVIWAVLFSTIGYVFGLGAEHFVGQALM
RHERLFIGLGIGLTVAALAWLVARHIAKRERRREQ
>Mature_194_residues
TEAIHHFIEQYGLLAVFLGCVAEGESAAILGGFFAHQHVFVLWHAIVAAALGAFVGDTCFFILGRSFADNRQVVRLRRRP
GFRRAYRLLNTHPDIFVLSNRYVYGMRLVGGIAAGLSTIAAPRFVILNAISSVIWAVLFSTIGYVFGLGAEHFVGQALMR
HERLFIGLGIGLTVAALAWLVARHIAKRERRREQ

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI87082056, Length=144, Percent_Identity=34.0277777777778, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21621; Mature: 21490

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAIHHFIEQYGLLAVFLGCVAEGESAAILGGFFAHQHVFVLWHAIVAAALGAFVGDTC
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFILGRSFADNRQVVRLRRRPGFRRAYRLLNTHPDIFVLSNRYVYGMRLVGGIAAGLSTI
HHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
AAPRFVILNAISSVIWAVLFSTIGYVFGLGAEHFVGQALMRHERLFIGLGIGLTVAALAW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LVARHIAKRERRREQ
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
TEAIHHFIEQYGLLAVFLGCVAEGESAAILGGFFAHQHVFVLWHAIVAAALGAFVGDTC
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFILGRSFADNRQVVRLRRRPGFRRAYRLLNTHPDIFVLSNRYVYGMRLVGGIAAGLSTI
HHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
AAPRFVILNAISSVIWAVLFSTIGYVFGLGAEHFVGQALMRHERLFIGLGIGLTVAALAW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LVARHIAKRERRREQ
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]