Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470968
Identifier: 13470968
GI number: 13470968
Start: 644570
End: 645973
Strand: Reverse
Name: 13470968
Synonym: mll0814
Alternate gene names: NA
Gene position: 645973-644570 (Counterclockwise)
Preceding gene: 13470969
Following gene: 13470967
Centisome position: 9.18
GC content: 61.68
Gene sequence:
>1404_bases ATGGCCTCCGGCATCGGCCGGAGGCCATCTCCCTCAGGCGCTGTCAGCTGGACTGACCTGCGCGGCATGTGGCATCCCCA CGGTTTAGACGTTTTTTACGATGCCGGACTACAACACGCCTTTTCTACCACTGGTTGTTGTATGTTTACGCAAAGGCAAT CCAGGGATAGTAGGCTCGTACCCTTGGGATCAGACTGGCCAGCGCAGGACTTCGACTTCACGATGCATCTTGCTTCCGAA GATACCGGAATGGAAAAGCTGGCTGCGCCGTCCGTGCTGGCAACTCAGCACGGCACGGTTCGGCCACTCGCCGCCGAAGA TCTCGAGCGGGTCGCCGCACTCTTCCTGACCAAGTTTCGCCGTCGGCGACGTCACCTCCTCGATCGGGCGATCGCTGAGG TGGCCGAGTATATGAGGAAGATCTATCTCGCCCCTACCGACCAGTCCGGCGCGAGCAGCGCTCTTGTCCAGATCAACCCG CAGGGCGATCTGGGTGGCTTCCTCGGTGTCCTGAAAGCCTGCTACGAGCTCAACGGAGCGGTGCTGAATGCCGCGATCAT CGGTCCGCTCATGGCCGACACCGGCACCGATCACGGTTCGGCCGGACCGCAATTGCTGCGTGCCGTGCATCAAGGCGAAT TCGATCTGCACCTGACCGATTCGGCCAACCGTGTATCCCTGGCATTCGCGCGCCCGATGAAATACCAGCTCCTGCCAACC CATTGCCTGGGATGGACCCGCATTTTCCGCCCGGCCGCGGTGGCGTCCGCCGTGGTTCGCGGCAGATGGCCGGGCCTGTC TCGCTTCGTACTCGATCCCTGCGCCAGGGCATTCGATCCTTTTACGAGAAAAAGGTTCGAACCGACCGTCCAGCATTCCT CGTCACATCGCGTCCATCGGCAGCCGATGGACGCCGCGCAATTTGCGGAGCGGCTGCCGACGATTGTGTCCGATTACGCG CTGCGGCCGCGCTGGCAGGATGATGAGCTGCTGCGGCTGCTCGCGCTGGCGGCCGAGAAACGGGCCGACGGCCCCCTTCA CTTTAGTGGAACCTACGACGAAGCCGGTAAAATGCTTGGTTGCTACGCTTTCTACGGTCAGGCCGGCGGCATCGCGAACC TGTTGCAGATCCAGTCCTCTGGGCCTCACTGGGGCGCGACGCTTGATAGCCTGATCGAGGAGGCATGGAATATGGGCTGT GCGGGCATTATCGGGCAGACGCAGAACAGGTTCATGCCGCAGCTCTTCAGCTACAAGAATGTTTTCTTCCGCTATGCCGG GGGGACGATGGTGCGCTCGCGCATCCCCGAGGTCGCGCAAGCGGTCCGTTCTGGCGACATCTTCATCGGTGGGTTGATGG GCGATCGCTGGACCCGCCTCAGTTCAGATGATTTCGGCCGCTGA
Upstream 100 bases:
>100_bases CTCGCACGACGAGCTGATCCGGCTGAAGGGCGGCATCTACCGCCGCCTGTTCGAGCGTCAGGCGCTCGAACTGACCAAGG GACTGGTCATCTGACCTGAG
Downstream 100 bases:
>100_bases TCGCTTTCAACCAGCTGTTCTGATCGGATAAGGGCCATGCGTCTCGCAGGGCGCTAGTCTTTTCATCGCGCGCATCATGT TCTATGTGTGCCGACCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MASGIGRRPSPSGAVSWTDLRGMWHPHGLDVFYDAGLQHAFSTTGCCMFTQRQSRDSRLVPLGSDWPAQDFDFTMHLASE DTGMEKLAAPSVLATQHGTVRPLAAEDLERVAALFLTKFRRRRRHLLDRAIAEVAEYMRKIYLAPTDQSGASSALVQINP QGDLGGFLGVLKACYELNGAVLNAAIIGPLMADTGTDHGSAGPQLLRAVHQGEFDLHLTDSANRVSLAFARPMKYQLLPT HCLGWTRIFRPAAVASAVVRGRWPGLSRFVLDPCARAFDPFTRKRFEPTVQHSSSHRVHRQPMDAAQFAERLPTIVSDYA LRPRWQDDELLRLLALAAEKRADGPLHFSGTYDEAGKMLGCYAFYGQAGGIANLLQIQSSGPHWGATLDSLIEEAWNMGC AGIIGQTQNRFMPQLFSYKNVFFRYAGGTMVRSRIPEVAQAVRSGDIFIGGLMGDRWTRLSSDDFGR
Sequences:
>Translated_467_residues MASGIGRRPSPSGAVSWTDLRGMWHPHGLDVFYDAGLQHAFSTTGCCMFTQRQSRDSRLVPLGSDWPAQDFDFTMHLASE DTGMEKLAAPSVLATQHGTVRPLAAEDLERVAALFLTKFRRRRRHLLDRAIAEVAEYMRKIYLAPTDQSGASSALVQINP QGDLGGFLGVLKACYELNGAVLNAAIIGPLMADTGTDHGSAGPQLLRAVHQGEFDLHLTDSANRVSLAFARPMKYQLLPT HCLGWTRIFRPAAVASAVVRGRWPGLSRFVLDPCARAFDPFTRKRFEPTVQHSSSHRVHRQPMDAAQFAERLPTIVSDYA LRPRWQDDELLRLLALAAEKRADGPLHFSGTYDEAGKMLGCYAFYGQAGGIANLLQIQSSGPHWGATLDSLIEEAWNMGC AGIIGQTQNRFMPQLFSYKNVFFRYAGGTMVRSRIPEVAQAVRSGDIFIGGLMGDRWTRLSSDDFGR >Mature_466_residues ASGIGRRPSPSGAVSWTDLRGMWHPHGLDVFYDAGLQHAFSTTGCCMFTQRQSRDSRLVPLGSDWPAQDFDFTMHLASED TGMEKLAAPSVLATQHGTVRPLAAEDLERVAALFLTKFRRRRRHLLDRAIAEVAEYMRKIYLAPTDQSGASSALVQINPQ GDLGGFLGVLKACYELNGAVLNAAIIGPLMADTGTDHGSAGPQLLRAVHQGEFDLHLTDSANRVSLAFARPMKYQLLPTH CLGWTRIFRPAAVASAVVRGRWPGLSRFVLDPCARAFDPFTRKRFEPTVQHSSSHRVHRQPMDAAQFAERLPTIVSDYAL RPRWQDDELLRLLALAAEKRADGPLHFSGTYDEAGKMLGCYAFYGQAGGIANLLQIQSSGPHWGATLDSLIEEAWNMGCA GIIGQTQNRFMPQLFSYKNVFFRYAGGTMVRSRIPEVAQAVRSGDIFIGGLMGDRWTRLSSDDFGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51525; Mature: 51394
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGIGRRPSPSGAVSWTDLRGMWHPHGLDVFYDAGLQHAFSTTGCCMFTQRQSRDSRLV CCCCCCCCCCCCCCEEEHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEE PLGSDWPAQDFDFTMHLASEDTGMEKLAAPSVLATQHGTVRPLAAEDLERVAALFLTKFR ECCCCCCCCCCCEEEEECCCCCCHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHH RRRRHLLDRAIAEVAEYMRKIYLAPTDQSGASSALVQINPQGDLGGFLGVLKACYELNGA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCH VLNAAIIGPLMADTGTDHGSAGPQLLRAVHQGEFDLHLTDSANRVSLAFARPMKYQLLPT HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCEEECCH HCLGWTRIFRPAAVASAVVRGRWPGLSRFVLDPCARAFDPFTRKRFEPTVQHSSSHRVHR HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHCCCCCCCCC QPMDAAQFAERLPTIVSDYALRPRWQDDELLRLLALAAEKRADGPLHFSGTYDEAGKMLG CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCEEE CYAFYGQAGGIANLLQIQSSGPHWGATLDSLIEEAWNMGCAGIIGQTQNRFMPQLFSYKN HHHHHCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHH VFFRYAGGTMVRSRIPEVAQAVRSGDIFIGGLMGDRWTRLSSDDFGR HHEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure ASGIGRRPSPSGAVSWTDLRGMWHPHGLDVFYDAGLQHAFSTTGCCMFTQRQSRDSRLV CCCCCCCCCCCCCEEEHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEE PLGSDWPAQDFDFTMHLASEDTGMEKLAAPSVLATQHGTVRPLAAEDLERVAALFLTKFR ECCCCCCCCCCCEEEEECCCCCCHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHH RRRRHLLDRAIAEVAEYMRKIYLAPTDQSGASSALVQINPQGDLGGFLGVLKACYELNGA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCH VLNAAIIGPLMADTGTDHGSAGPQLLRAVHQGEFDLHLTDSANRVSLAFARPMKYQLLPT HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCEEECCH HCLGWTRIFRPAAVASAVVRGRWPGLSRFVLDPCARAFDPFTRKRFEPTVQHSSSHRVHR HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHCCCCCCCCC QPMDAAQFAERLPTIVSDYALRPRWQDDELLRLLALAAEKRADGPLHFSGTYDEAGKMLG CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCEEE CYAFYGQAGGIANLLQIQSSGPHWGATLDSLIEEAWNMGCAGIIGQTQNRFMPQLFSYKN HHHHHCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHH VFFRYAGGTMVRSRIPEVAQAVRSGDIFIGGLMGDRWTRLSSDDFGR HHEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA