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The map label for this gene is yrbE [C]

Identifier: 13470959

GI number: 13470959

Start: 633118

End: 634305

Strand: Reverse

Name: yrbE [C]

Synonym: mll0801

Alternate gene names: 13470959

Gene position: 634305-633118 (Counterclockwise)

Preceding gene: 13470961

Following gene: 13470958

Centisome position: 9.02

GC content: 63.3

Gene sequence:

>1188_bases
ATGTTGACCATCGGCAAGCGCGACGCAAGCGGTAGAGCCGCCTCGGAGGCTGACCACCAACCACGCGTGGCGGTCGGCGA
GGAGGCTGGCGTACTCGGCTGCGCGTTTTCCGGAATCTGGACGACACGGACCGTGGCGCTGATCGACGCCGACATGCGCA
AGATCGAGAAACGAAGCGGTTTCAAGACTTTGGCGCTCGATCTTTCGAAAATCGAGAAGATCGATACCGCCGGCGCCTGG
CTGATCGACCGGCTGGTCAGCGCCTTCGAGAAGAAGAACGTCGAGGTCCGGCTGCAAGGCCAAAGCGAGATCGCGTCCAT
CCTGCTCGACGCGGTCGGCGAGGCTGTCCGGCGCGAACCCGAATCCGGTCCGGCGCGGCCGCCCAACATCATCATTCGCG
CACTGGAGGCGGTTGGCCGCCGCGTCTACGAGATGCGTGACGATTTTCTCGCCTCGATGAATATTCTGGGCGCCACCATC
CGCGGCGCGCAGATGAAGCTCGGCCGTGGCCATGCCGTCAATCCGGCGGCGATCTTCAACCAGATCGACCGCATGGGCGT
CGGCGCCATTCCGGTGGTGGTGCTGATGTCGGCCATCGTCGGCGCCATCGTCGCCCAGCAAGGCGCCTACCAGCTCAGCT
ATTTCGGCGCCGATATCTTCGTCGTCGACCTCGTCGGCGTGCTGATCCTGCGCGAACTCGGCGTGCTGATGACGGCAATC
ATGATCGCCGGCCGCTCCGGCAGCGCGATCACCGCCGAGATCGGCTCGATGAAGATGCGCGAGGAGGTCGACGCGCTGAA
GGTCATCGGTCTCAATCCAATCGGGGTCCTGGTCTTTCCGCGCCTGGTTGCGCTGGTGATCGCCTTGCCGTGCCTGACGA
TCATCGCCAATTTTGCAGCACTTGGCGGCGGCATCGTCGCGGCCTGGCTCTACTCCGATATCCCACCCGCCGCGTTCATC
GACCGCTTGCGTGTCGCCATCGATCTCAGCACGATATTCGCCGGGCTGATCAAGGCACCGTTCATGGCCATGATCATCGG
CACGATCGCCTCGGTGGAAGGCATGAAGGTCGGCGGCAGTGCCGAATCGCTCGGCCAGCACGTGACCGCCTCCGTGGTGA
AGTCGATCTTCGTCGTCATCATCCTCGATGGGCTTTTCGCCATGTTCTACGCAGCGATCGAGTTCTGA

Upstream 100 bases:

>100_bases
TCAACCGAAATGACACGCGCCATATTTTTCTGCTCCGGCTGTGCGAGAAGGGTTGTCGGCAAATCGACAAGGTCGGACCC
ATCAGGCTAAACAGGACGTC

Downstream 100 bases:

>100_bases
CACAATGGCGAAGGGCAACGGCATCAAGGTGGAGGAAAAGGACGAGAGCGAGATCGTCCTTTCGGTGCGCGACGTCACCG
TTGCCATCGAGGACAAGCTG

Product: permease of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MLTIGKRDASGRAASEADHQPRVAVGEEAGVLGCAFSGIWTTRTVALIDADMRKIEKRSGFKTLALDLSKIEKIDTAGAW
LIDRLVSAFEKKNVEVRLQGQSEIASILLDAVGEAVRREPESGPARPPNIIIRALEAVGRRVYEMRDDFLASMNILGATI
RGAQMKLGRGHAVNPAAIFNQIDRMGVGAIPVVVLMSAIVGAIVAQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAI
MIAGRSGSAITAEIGSMKMREEVDALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGIVAAWLYSDIPPAAFI
DRLRVAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVIILDGLFAMFYAAIEF

Sequences:

>Translated_395_residues
MLTIGKRDASGRAASEADHQPRVAVGEEAGVLGCAFSGIWTTRTVALIDADMRKIEKRSGFKTLALDLSKIEKIDTAGAW
LIDRLVSAFEKKNVEVRLQGQSEIASILLDAVGEAVRREPESGPARPPNIIIRALEAVGRRVYEMRDDFLASMNILGATI
RGAQMKLGRGHAVNPAAIFNQIDRMGVGAIPVVVLMSAIVGAIVAQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAI
MIAGRSGSAITAEIGSMKMREEVDALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGIVAAWLYSDIPPAAFI
DRLRVAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVIILDGLFAMFYAAIEF
>Mature_395_residues
MLTIGKRDASGRAASEADHQPRVAVGEEAGVLGCAFSGIWTTRTVALIDADMRKIEKRSGFKTLALDLSKIEKIDTAGAW
LIDRLVSAFEKKNVEVRLQGQSEIASILLDAVGEAVRREPESGPARPPNIIIRALEAVGRRVYEMRDDFLASMNILGATI
RGAQMKLGRGHAVNPAAIFNQIDRMGVGAIPVVVLMSAIVGAIVAQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAI
MIAGRSGSAITAEIGSMKMREEVDALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAALGGGIVAAWLYSDIPPAAFI
DRLRVAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGSAESLGQHVTASVVKSIFVVIILDGLFAMFYAAIEF

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=216, Percent_Identity=29.1666666666667, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 41872; Mature: 41872

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTIGKRDASGRAASEADHQPRVAVGEEAGVLGCAFSGIWTTRTVALIDADMRKIEKRSG
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
FKTLALDLSKIEKIDTAGAWLIDRLVSAFEKKNVEVRLQGQSEIASILLDAVGEAVRREP
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCC
ESGPARPPNIIIRALEAVGRRVYEMRDDFLASMNILGATIRGAQMKLGRGHAVNPAAIFN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHH
QIDRMGVGAIPVVVLMSAIVGAIVAQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAI
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHH
MIAGRSGSAITAEIGSMKMREEVDALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAA
HHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGGIVAAWLYSDIPPAAFIDRLRVAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGS
HCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AESLGQHVTASVVKSIFVVIILDGLFAMFYAAIEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTIGKRDASGRAASEADHQPRVAVGEEAGVLGCAFSGIWTTRTVALIDADMRKIEKRSG
CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
FKTLALDLSKIEKIDTAGAWLIDRLVSAFEKKNVEVRLQGQSEIASILLDAVGEAVRREP
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCC
ESGPARPPNIIIRALEAVGRRVYEMRDDFLASMNILGATIRGAQMKLGRGHAVNPAAIFN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHH
QIDRMGVGAIPVVVLMSAIVGAIVAQQGAYQLSYFGADIFVVDLVGVLILRELGVLMTAI
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHH
MIAGRSGSAITAEIGSMKMREEVDALKVIGLNPIGVLVFPRLVALVIALPCLTIIANFAA
HHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGGIVAAWLYSDIPPAAFIDRLRVAIDLSTIFAGLIKAPFMAMIIGTIASVEGMKVGGS
HCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AESLGQHVTASVVKSIFVVIILDGLFAMFYAAIEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]