Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
---|---|
Accession | NC_002678 |
Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13470954
Identifier: 13470954
GI number: 13470954
Start: 622716
End: 623192
Strand: Direct
Name: 13470954
Synonym: mlr0794
Alternate gene names: NA
Gene position: 622716-623192 (Clockwise)
Preceding gene: 13470951
Following gene: 13470955
Centisome position: 8.85
GC content: 61.64
Gene sequence:
>477_bases GTGCCGTCATGGGCGATGAAGGTCAGCTTGGTCATTTGTCACCTGAAGGGAGTTTCCGCCGAGATAATCACTCCGGCAGA CAAGTCAACTGCCGCGCGAAAGCGCCGCTCGGTGACGTTTTTCCAAAAAACCGGGTCAGCGATTGATGGCGGCGATGAAA TCGCGCACTTCGTCGATCAGTTTGCCGAGCCGATTGAGGGTCTGGCCGTCTTCCGGCTGCCGCTCGATCTCGGTGGCACA ATCGGCGATGGCAAAGGCGCCGACGCCGCGAGCGGACCCCTTCAACCCATGCGCCAGCAGAAGCCGGTCCTTGAGATCGG CATCGACTATTTTGTCGCGTACCGACAGCGCCTGCTGTACAAACAGCGCCAGCACCTCTTGCTCGAGGGCGCGGTCGCCC ATCGTCTGCCGGGCAAGGTGTGCCAAATCGACCGGTCGGGACTGCCTGGTTCCCGAGACGTCGCCTCCGGGCATTGA
Upstream 100 bases:
>100_bases GGCGCAGGCGCCGCCGCATTCCGCCTCGATCCCCGGCACGGCGTTGCGGATAGCGTTTTCCATGACCGTCGAGCCGTTTT CGGCATCCACGTCGAATTGT
Downstream 100 bases:
>100_bases GAAGGCAATGCCGCTTTCGCCACGCATGAACTCGAACTCCGTTTCTTAGGCCGCCTGAAAAACTAGGCGAATCCAATGGA CAACGGGTTAATGGATGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MPSWAMKVSLVICHLKGVSAEIITPADKSTAARKRRSVTFFQKTGSAIDGGDEIAHFVDQFAEPIEGLAVFRLPLDLGGT IGDGKGADAASGPLQPMRQQKPVLEIGIDYFVAYRQRLLYKQRQHLLLEGAVAHRLPGKVCQIDRSGLPGSRDVASGH
Sequences:
>Translated_158_residues MPSWAMKVSLVICHLKGVSAEIITPADKSTAARKRRSVTFFQKTGSAIDGGDEIAHFVDQFAEPIEGLAVFRLPLDLGGT IGDGKGADAASGPLQPMRQQKPVLEIGIDYFVAYRQRLLYKQRQHLLLEGAVAHRLPGKVCQIDRSGLPGSRDVASGH >Mature_157_residues PSWAMKVSLVICHLKGVSAEIITPADKSTAARKRRSVTFFQKTGSAIDGGDEIAHFVDQFAEPIEGLAVFRLPLDLGGTI GDGKGADAASGPLQPMRQQKPVLEIGIDYFVAYRQRLLYKQRQHLLLEGAVAHRLPGKVCQIDRSGLPGSRDVASGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17090; Mature: 16959
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSWAMKVSLVICHLKGVSAEIITPADKSTAARKRRSVTFFQKTGSAIDGGDEIAHFVDQ CCCHHHHHHHHEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH FAEPIEGLAVFRLPLDLGGTIGDGKGADAASGPLQPMRQQKPVLEIGIDYFVAYRQRLLY HHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH KQRQHLLLEGAVAHRLPGKVCQIDRSGLPGSRDVASGH HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC >Mature Secondary Structure PSWAMKVSLVICHLKGVSAEIITPADKSTAARKRRSVTFFQKTGSAIDGGDEIAHFVDQ CCHHHHHHHHEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH FAEPIEGLAVFRLPLDLGGTIGDGKGADAASGPLQPMRQQKPVLEIGIDYFVAYRQRLLY HHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH KQRQHLLLEGAVAHRLPGKVCQIDRSGLPGSRDVASGH HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA