Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
---|---|
Accession | NC_002678 |
Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is yusP [H]
Identifier: 13470951
GI number: 13470951
Start: 619811
End: 621304
Strand: Direct
Name: yusP [H]
Synonym: mlr0791
Alternate gene names: 13470951
Gene position: 619811-621304 (Clockwise)
Preceding gene: 13470950
Following gene: 13470954
Centisome position: 8.81
GC content: 64.93
Gene sequence:
>1494_bases ATGGACAAGATCATGGACCAGGCTGTCGACAAGCAGACCATGGCGGCTGCCGCCACGCCGCTGACCGAAAGCGAGAAGAA CGCCATCATCGGCGGCGTTCTTCTGTCGATGCTGTTGGCGGCGCTTGACCAGACCATCATCGCACCCGCAATGCCGACCA TCGCGCGGGCGCTCGGCCACGCCGAGTATCTGCCCTGGATGGTCACCGGCTATCTCCTGACCGCGACCGCCGTGGCGCCG CTCTACGGCAAGATTTCCGACGTCTATGGCCGCCGCCCGACCATTTACGCGGCGATCCTCATCTTCCTCGTCGGATCGCT GGTCAGCGCCATGGCCCCCAACATGTTCGTGCTGGTGATAGGGCGCGCGATCCAGGGTGCCGGCGGCGGCGGCCTGTTTG CGCTGGCGCAAACCGTGATCGGCGACCTCGTGCCGCCGCGCGAACGCGCACGTTACGCGGCCTGGGTCTCGGGCACCTGG GCCGTCGCCAGTATTGCCGGGCCACTGCTGGGCGGCACCTTTGCCGAGCACCTGCACTGGTCGCTGATCTTCTGGATCAA CATTCCGCTTGGGCTTTTGGCCATGGCGATCATCAACAAGCCGCTGAAGAAGCTGCCGATCGCGGCCAAACATCACCGCA TCGACGGGTTGGGCGCCCTGCTTCTGGTTATCGCCACGGCACTTCTGCTTCTGGCGCTCAACTGGGGCGGGAGCACCTAT GCGTGGTTTTCGCGCGAAATTGTCGGGCTCGTGGCCGGTTCGGCCGTGTTCTGGGCCCTGTTCGCAATAAGGCTGATGGG GGCGACCGAGCCGTTGATCTCGCTCGAAGTGCTGGGCAACCCGATCGTGCTCGCCGGTGCGCTATCGATGTTCCTGCTGC AGGCGGCGAATATCGGCGCTTCGGTCTACCTGCCGGTCTATCTGCAAACCGTGATCGGGCTTTCCGTCAGCGAATCGGGA ATGGCCATGCTCGGCCTTTTGCTCGGCACGGTCGCCGGTGCTGCTACAAGCGGCCGCCTGATCCCTCGCTTCGTGCACTA CAAGCGCATCGCCATGATCGGCATCACCTTGGCCATTGTCAGCATCGGCTTGCTCAGTGCCATTGCCGGACACGCCTCGC TGCTCGAGGTCGAGATCCTGACCACCCTGATCGGCCTGGGCAGCGGAACGACATTCCCGGTCGCGACCGTCTCCGTCCAG AACGCCGTCGATCGAACTCATCTCGGGGTTGCGACCGGCGTGCTGACCTTCCTGCGTACGCTGGGTGGCGCGCTGGGCGT CGCCCTGCTCGGCGCGGTCGCGATCGGCTATGGCCTGCCGCTCTCCGCCGAGGGCTCGCAGACACATATCCAGCTGACCT CAGCCCTGCCGTTCGTAATGATCTTCATCACCGCCGGCATCACCCTGGTGCTGGCGCTTGTCGCCATGATGCTGATGCCG GAAAAGGCGCTGCGCGGACGCGACGAGGTGGCCGCGCCCGTCCTCGCGGAATAG
Upstream 100 bases:
>100_bases GGTTGGCAAGCCGCGACCCTCAAGGCACGAGCACCACGACGGATTGCGCGGCGAACGCACCAGGCGAGCCCAATCGTGAC CCGGATCGCGCGCAAAGCAC
Downstream 100 bases:
>100_bases AAGCGCTTCTTTACCCCACCACGCCGAGCTTCTTCTGCAGGCTGGTCGACGAGGTCGTATACTGGAACACGATCCGCTCG CCGGGGCTGACGATGCGCTT
Product: membrane transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MDKIMDQAVDKQTMAAAATPLTESEKNAIIGGVLLSMLLAALDQTIIAPAMPTIARALGHAEYLPWMVTGYLLTATAVAP LYGKISDVYGRRPTIYAAILIFLVGSLVSAMAPNMFVLVIGRAIQGAGGGGLFALAQTVIGDLVPPRERARYAAWVSGTW AVASIAGPLLGGTFAEHLHWSLIFWINIPLGLLAMAIINKPLKKLPIAAKHHRIDGLGALLLVIATALLLLALNWGGSTY AWFSREIVGLVAGSAVFWALFAIRLMGATEPLISLEVLGNPIVLAGALSMFLLQAANIGASVYLPVYLQTVIGLSVSESG MAMLGLLLGTVAGAATSGRLIPRFVHYKRIAMIGITLAIVSIGLLSAIAGHASLLEVEILTTLIGLGSGTTFPVATVSVQ NAVDRTHLGVATGVLTFLRTLGGALGVALLGAVAIGYGLPLSAEGSQTHIQLTSALPFVMIFITAGITLVLALVAMMLMP EKALRGRDEVAAPVLAE
Sequences:
>Translated_497_residues MDKIMDQAVDKQTMAAAATPLTESEKNAIIGGVLLSMLLAALDQTIIAPAMPTIARALGHAEYLPWMVTGYLLTATAVAP LYGKISDVYGRRPTIYAAILIFLVGSLVSAMAPNMFVLVIGRAIQGAGGGGLFALAQTVIGDLVPPRERARYAAWVSGTW AVASIAGPLLGGTFAEHLHWSLIFWINIPLGLLAMAIINKPLKKLPIAAKHHRIDGLGALLLVIATALLLLALNWGGSTY AWFSREIVGLVAGSAVFWALFAIRLMGATEPLISLEVLGNPIVLAGALSMFLLQAANIGASVYLPVYLQTVIGLSVSESG MAMLGLLLGTVAGAATSGRLIPRFVHYKRIAMIGITLAIVSIGLLSAIAGHASLLEVEILTTLIGLGSGTTFPVATVSVQ NAVDRTHLGVATGVLTFLRTLGGALGVALLGAVAIGYGLPLSAEGSQTHIQLTSALPFVMIFITAGITLVLALVAMMLMP EKALRGRDEVAAPVLAE >Mature_497_residues MDKIMDQAVDKQTMAAAATPLTESEKNAIIGGVLLSMLLAALDQTIIAPAMPTIARALGHAEYLPWMVTGYLLTATAVAP LYGKISDVYGRRPTIYAAILIFLVGSLVSAMAPNMFVLVIGRAIQGAGGGGLFALAQTVIGDLVPPRERARYAAWVSGTW AVASIAGPLLGGTFAEHLHWSLIFWINIPLGLLAMAIINKPLKKLPIAAKHHRIDGLGALLLVIATALLLLALNWGGSTY AWFSREIVGLVAGSAVFWALFAIRLMGATEPLISLEVLGNPIVLAGALSMFLLQAANIGASVYLPVYLQTVIGLSVSESG MAMLGLLLGTVAGAATSGRLIPRFVHYKRIAMIGITLAIVSIGLLSAIAGHASLLEVEILTTLIGLGSGTTFPVATVSVQ NAVDRTHLGVATGVLTFLRTLGGALGVALLGAVAIGYGLPLSAEGSQTHIQLTSALPFVMIFITAGITLVLALVAMMLMP EKALRGRDEVAAPVLAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=420, Percent_Identity=28.8095238095238, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1789042, Length=433, Percent_Identity=26.3279445727483, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1790195, Length=462, Percent_Identity=26.8398268398268, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1788710, Length=434, Percent_Identity=24.8847926267281, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1788392, Length=332, Percent_Identity=28.9156626506024, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1790146, Length=168, Percent_Identity=25, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI32564663, Length=145, Percent_Identity=28.2758620689655, Blast_Score=65, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6323735, Length=446, Percent_Identity=25.7847533632287, Blast_Score=130, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6322958, Length=442, Percent_Identity=25.3393665158371, Blast_Score=127, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6321663, Length=496, Percent_Identity=25.8064516129032, Blast_Score=118, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6319770, Length=385, Percent_Identity=26.7532467532467, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6325455, Length=462, Percent_Identity=24.2424242424242, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6319783, Length=362, Percent_Identity=23.7569060773481, Blast_Score=83, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6324264, Length=187, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6324415, Length=401, Percent_Identity=25.6857855361596, Blast_Score=67, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6321747, Length=389, Percent_Identity=24.4215938303342, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 51654; Mature: 51654
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKIMDQAVDKQTMAAAATPLTESEKNAIIGGVLLSMLLAALDQTIIAPAMPTIARALGH CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AEYLPWMVTGYLLTATAVAPLYGKISDVYGRRPTIYAAILIFLVGSLVSAMAPNMFVLVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE GRAIQGAGGGGLFALAQTVIGDLVPPRERARYAAWVSGTWAVASIAGPLLGGTFAEHLHW HHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH SLIFWINIPLGLLAMAIINKPLKKLPIAAKHHRIDGLGALLLVIATALLLLALNWGGSTY HHHHEECCCHHHHHHHHHHCCHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCH AWFSREIVGLVAGSAVFWALFAIRLMGATEPLISLEVLGNPIVLAGALSMFLLQAANIGA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCHHHHHHHHHHHHHHHCCCC SVYLPVYLQTVIGLSVSESGMAMLGLLLGTVAGAATSGRLIPRFVHYKRIAMIGITLAIV HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH SIGLLSAIAGHASLLEVEILTTLIGLGSGTTFPVATVSVQNAVDRTHLGVATGVLTFLRT HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH LGGALGVALLGAVAIGYGLPLSAEGSQTHIQLTSALPFVMIFITAGITLVLALVAMMLMP HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC EKALRGRDEVAAPVLAE HHHHCCCHHHCCCCCCC >Mature Secondary Structure MDKIMDQAVDKQTMAAAATPLTESEKNAIIGGVLLSMLLAALDQTIIAPAMPTIARALGH CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AEYLPWMVTGYLLTATAVAPLYGKISDVYGRRPTIYAAILIFLVGSLVSAMAPNMFVLVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEE GRAIQGAGGGGLFALAQTVIGDLVPPRERARYAAWVSGTWAVASIAGPLLGGTFAEHLHW HHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH SLIFWINIPLGLLAMAIINKPLKKLPIAAKHHRIDGLGALLLVIATALLLLALNWGGSTY HHHHEECCCHHHHHHHHHHCCHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCH AWFSREIVGLVAGSAVFWALFAIRLMGATEPLISLEVLGNPIVLAGALSMFLLQAANIGA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCHHHHHHHHHHHHHHHCCCC SVYLPVYLQTVIGLSVSESGMAMLGLLLGTVAGAATSGRLIPRFVHYKRIAMIGITLAIV HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH SIGLLSAIAGHASLLEVEILTTLIGLGSGTTFPVATVSVQNAVDRTHLGVATGVLTFLRT HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH LGGALGVALLGAVAIGYGLPLSAEGSQTHIQLTSALPFVMIFITAGITLVLALVAMMLMP HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC EKALRGRDEVAAPVLAE HHHHCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]