Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13470942

Identifier: 13470942

GI number: 13470942

Start: 611887

End: 612045

Strand: Reverse

Name: 13470942

Synonym: msl0779

Alternate gene names: NA

Gene position: 612045-611887 (Counterclockwise)

Preceding gene: 13470943

Following gene: 13470937

Centisome position: 8.7

GC content: 64.15

Gene sequence:

>159_bases
ATGGCCGCCGCGCTGCAGGAAGCGATCACCAAGGATCCGTCCAAGGCAGCTGACCTGACCGCCAAGGTCCAGGCGGTGAC
AACCAAGTACCAGGGCACCACGACACTCGCCGACGCCTGCAAGGCGTATGACGAGGTGACGGCCGCCATCAAGGGCTAA

Upstream 100 bases:

>100_bases
GTTTTTGCTTGTTGCCGTCGGCCTGGCGGTGCTTGCCGGTTCGGCCTGCTCGAAGGCGCCGGAATGCACGGCCGAGATCG
CGACCAAGAAAGCGCAGGAC

Downstream 100 bases:

>100_bases
GCGCCTGATTCGACTGGTTCAAGGAGGCGGTGGCGATGGGCTGCCGCCTCTTTGCTTTGGGGGGACGTGTCAGGGGCGCT
AACGCGCTCAGTTCGGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 51

Protein sequence:

>52_residues
MAAALQEAITKDPSKAADLTAKVQAVTTKYQGTTTLADACKAYDEVTAAIKG

Sequences:

>Translated_52_residues
MAAALQEAITKDPSKAADLTAKVQAVTTKYQGTTTLADACKAYDEVTAAIKG
>Mature_51_residues
AAALQEAITKDPSKAADLTAKVQAVTTKYQGTTTLADACKAYDEVTAAIKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5345; Mature: 5214

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAALQEAITKDPSKAADLTAKVQAVTTKYQGTTTLADACKAYDEVTAAIKG
CCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AAALQEAITKDPSKAADLTAKVQAVTTKYQGTTTLADACKAYDEVTAAIKG
CHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA