Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470764
Identifier: 13470764
GI number: 13470764
Start: 408685
End: 409152
Strand: Direct
Name: 13470764
Synonym: mlr0556
Alternate gene names: NA
Gene position: 408685-409152 (Clockwise)
Preceding gene: 13470763
Following gene: 13470769
Centisome position: 5.81
GC content: 61.54
Gene sequence:
>468_bases ATGAACCATTTCACGTCAATCACAGGGCTCGCGGCCGCGCTGTCTCTCTGCGCTGCCGGCGCCTCGGCCGAGACCATGCA CATCTTCTGGAAGGATTTGCGCCCGGCGACCCAGTTAGCCGGCTATGCATTGCCGGTCGATCGCGACGGCGATCTCGTCT ATCAGTTCCTGCTGGTGCCATGGACGGGCGCATGCAGCCACATGCCGACGCCGCCGCCCAATCAGATCGTGCTGGTCACG CCAGCCCATCCCTACAAGATGTCGCAAGCCTACCAGTCGGTCGCCGTCACCGGCGCCCTGAAGCCGGACATCGAAAAGAG CCAGCTGTTCATTCTGGATGGCGTCAGCGTCATCCAGTCCGGTTATAGCGTGCGCAAAGCGGATGTGATCGGCGTCGACA CCGTGCCGGACACTGTCACCCTGCCGGTGAACTCGCCCTGGAGTTTCCTCAACAAGAAGAAGAACTGA
Upstream 100 bases:
>100_bases CCGTGAGGTCGGCATGGCCGGTTCTCGCCGACATGTGATGCGGCTCGAGCATTGACGTCATTTGGCATGGCGTCTTTACT CGCCTCCAAAGGGAGCGGCC
Downstream 100 bases:
>100_bases GCGGCGCCGCCCGCTCAGGCGGCGTTGGCGCCGGATTCCTTGTCCAGCACCATGTAGTCGAGCGGGATTTCGGTCGTATA CTTGATTTGCTCCATGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MNHFTSITGLAAALSLCAAGASAETMHIFWKDLRPATQLAGYALPVDRDGDLVYQFLLVPWTGACSHMPTPPPNQIVLVT PAHPYKMSQAYQSVAVTGALKPDIEKSQLFILDGVSVIQSGYSVRKADVIGVDTVPDTVTLPVNSPWSFLNKKKN
Sequences:
>Translated_155_residues MNHFTSITGLAAALSLCAAGASAETMHIFWKDLRPATQLAGYALPVDRDGDLVYQFLLVPWTGACSHMPTPPPNQIVLVT PAHPYKMSQAYQSVAVTGALKPDIEKSQLFILDGVSVIQSGYSVRKADVIGVDTVPDTVTLPVNSPWSFLNKKKN >Mature_155_residues MNHFTSITGLAAALSLCAAGASAETMHIFWKDLRPATQLAGYALPVDRDGDLVYQFLLVPWTGACSHMPTPPPNQIVLVT PAHPYKMSQAYQSVAVTGALKPDIEKSQLFILDGVSVIQSGYSVRKADVIGVDTVPDTVTLPVNSPWSFLNKKKN
Specific function: Unknown
COG id: COG3495
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16710; Mature: 16710
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHFTSITGLAAALSLCAAGASAETMHIFWKDLRPATQLAGYALPVDRDGDLVYQFLLVP CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCHHHHCCEECCCCCCCCEEEEEEEEC WTGACSHMPTPPPNQIVLVTPAHPYKMSQAYQSVAVTGALKPDIEKSQLFILDGVSVIQS CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHEECCCCCCCCCCEEEEEECHHHHHC GYSVRKADVIGVDTVPDTVTLPVNSPWSFLNKKKN CCCEECEEEEECCCCCCEEEEECCCCHHHHCCCCC >Mature Secondary Structure MNHFTSITGLAAALSLCAAGASAETMHIFWKDLRPATQLAGYALPVDRDGDLVYQFLLVP CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCHHHHCCEECCCCCCCCEEEEEEEEC WTGACSHMPTPPPNQIVLVTPAHPYKMSQAYQSVAVTGALKPDIEKSQLFILDGVSVIQS CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHEECCCCCCCCCCEEEEEECHHHHHC GYSVRKADVIGVDTVPDTVTLPVNSPWSFLNKKKN CCCEECEEEEECCCCCCEEEEECCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA